Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04287 ATGACCGGGAAGCTCCGAGTTTTCTATTTGAGTCTGCTGAGCCTAATTTTGAGGCTTCCAATGTGTGTTGTGGGAGCTCAACCGACAATGGAAATTGTTGCAAAAGAAAATAAGGTTACAGTGATGGACCATCTCACTGGTCATTTGACTGAGGAGATTGTTGATGATCCTATGGAGATTCCAAGAAAAATTTCACAGGAGTGGAGACCAGTTCTTAATGATGAACTTCCAGATGCATTCTGTGGTGGTTTGGCAGGTTATTTCTCTTATGACACAGTTCGCTATGTGGAAAAGAAAAAGTTACCATTTTCAGACGCCCCAAAGGATGACAGGAGCCTTGCAGACATCCATCTGGGCCTTTATGAGACTGTGATTGTGTTTGATCACGTGGAAAAGAAAGCGTATGTTATTCTTTGGGTGAGGACTGACCGGTACTCCTCGGCCGAGAGCGCTTACGAGGACGGAACAAAGCAATTAAACAAATTAGTGGCCAAATTACAAGATGACAAACCCCCAAGGCTTGCTCCTGGCGCTATTGATTTGAAAACTCGCCAATTTGGTACACCTTTAAAGGAATCAACCATGACACCTGATGCATACAAGGAGGCAGTCCTTCAGGCACAAGAACATATTAAAGCAGGAGATATTTTTCAGGTTGTATTAAGTCAGAGATTTGAACGAAGAACCTTCGCAGATCCATTTGAAGTTTATAGAGCATTGAGAGTTGTGAATCCAAGTCCATATATGACTTATTTGCAGGCTAGGGGGTGTATTCTTGCTGCTTCAAGTCCAGAGATTCTTGCGCGTATAAAGAATAAGAAGATTGTCAATCGTCCATTAGCTGGAACATGTAAAAGGGGCAACACGCCAGAAGAAGATGAAAAGTTATCAGCAAAGCTCTTGAAAGATGAAAAGCAATGTGCAGAGCATGTAATGCTGGTTGATTTGGGACGCAATGATGTTGGAAAGGTTGCAAAAAGTGGTTCTGTGAAGGTTGAGAAGCTTATGAATGTTGAGAGATATTCCCATGTCATGCACATAAGCTCGACGGTTACTGGAGAGCTGCAAGACCATTTGACCTGCTGGGATGCTCTCCGTGCTGCATTGCCTGTTGGAACTGTCAGTGGAGCACCGAAGGTGAGGGCCATGCAGTTAATCGATGATTTGGAGGTGGCAAGGCGGGGACCTTACAGTGGAGGGTTTGGATACATTTCTTTCTCTGGCGACATGGACATAGCTCTAGCTCTAAGGACAATCGTATTTCCAACCGGAACTAGGTACGACACAATGTACTCGTACAAGGACCTAAACAAACGCCAGGAGTGGATCGCACACCTTCAAGCTGGTGCTGGTATCGTGGCTGACAGTGACCCAACTGATGAGCACCAAGAGTGTCTAAACAAAGCTGCTGGTCTTGCTCGCTCCATCGACTTGGCTGAGGCTGCATTTGTTGATAAATAA 1461 0.4476 MTGKLRVFYLSLLSLILRLPMCVVGAQPTMEIVAKENKVTVMDHLTGHLTEEIVDDPMEIPRKISQEWRPVLNDELPDAFCGGLAGYFSYDTVRYVEKKKLPFSDAPKDDRSLADIHLGLYETVIVFDHVEKKAYVILWVRTDRYSSAESAYEDGTKQLNKLVAKLQDDKPPRLAPGAIDLKTRQFGTPLKESTMTPDAYKEAVLQAQEHIKAGDIFQVVLSQRFERRTFADPFEVYRALRVVNPSPYMTYLQARGCILAASSPEILARIKNKKIVNRPLAGTCKRGNTPEEDEKLSAKLLKDEKQCAEHVMLVDLGRNDVGKVAKSGSVKVEKLMNVERYSHVMHISSTVTGELQDHLTCWDALRAALPVGTVSGAPKVRAMQLIDDLEVARRGPYSGGFGYISFSGDMDIALALRTIVFPTGTRYDTMYSYKDLNKRQEWIAHLQAGAGIVADSDPTDEHQECLNKAAGLARSIDLAEAAFVDK 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04287 486 Pfam Anthranilate synthase component I, N terminal region 23 136 IPR006805 GO:0009058
Vivi3g04287 486 FunFam Anthranilate synthase component 1 18 484 - -
Vivi3g04287 486 SUPERFAMILY ADC synthase 24 479 IPR005801 GO:0009058
Vivi3g04287 486 Gene3D Anthranilate synthase 19 484 IPR005801 GO:0009058
Vivi3g04287 486 NCBIfam anthranilate synthase component I 23 476 IPR005256 GO:0000162|GO:0004049
Vivi3g04287 486 PANTHER AMINOBENZOATE/ANTHRANILATE SYNTHASE 23 485 IPR019999 GO:0009058
Vivi3g04287 486 Pfam chorismate binding enzyme 198 468 IPR015890 -
Vivi3g04287 486 PRINTS Anthranilate synthase component I signature 392 406 IPR019999 GO:0009058
Vivi3g04287 486 PRINTS Anthranilate synthase component I signature 298 311 IPR019999 GO:0009058
Vivi3g04287 486 PRINTS Anthranilate synthase component I signature 312 325 IPR019999 GO:0009058
Vivi3g04287 486 PRINTS Anthranilate synthase component I signature 407 421 IPR019999 GO:0009058
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04287 Vivi-Chr3 76759944 76764151 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04287 K01657 - gmx:100790900 772.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g04287 3 76759944 76764151 Vivi3g04287 3 76759944 76764151 ECH