Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04285 ATGGTTGATTTACACTGGAAATTAAACATGCCAAATTCCGACATGTCTTCCAAATCTCCAAAACTCTCTATCTCCGACAAATCCTCACCACGCAACAACTCTCTACCCTTGTTGCAACCACTTTCAATCACAAATGATATTTCGGCCGCGGCGCCTCCTCTTTGCGCGGCGTATGACTACTATATCCGAATCCCGGAGCTCCGCAAGCTTTGGGAATCAAGAGAATTCCCAAACTGGGGCAACGAACCAATCCTTAAACCAGCTTTGCAAGCACTCGAGATCACATTTGGTTTCATCTCTACTGTTCTCTCCGACCCCAGACCCTACACGAACCGTTCAGAATGGAACCGCAGACTCGAGTCCATCGCCACGCAGCAGATTGAGATTATCGCCATGCTATGTGAAGACGAGGAACAAAACCCCGAGACACGTGGCACAGTACCAACCGCTTATCTCAGCAGCGGCGATAGCAAAATCAGAAGCTACAGCGAGAGGAGTCTTCTTCCACAGCTTGCCACGTGGTACAAATCCAAGGACGTGGCACAGAGGATTCTTCTCTCCGTGGAGTGTCAAATGATGAGGTGTTCTTATACGCTAGGTTTGGGTGAACCGAACCTCGCCGGAAAACCGAGCCTCAGATACGACACCGTTTGCAAGCCGGACGAAGTTCACACGCTGAAAACGACGCCATATGACGACCGTATCGATAACTACGAGAATCACGCGGTGCACGCGACTCATCAGATCGTTGAGTCGTGGATCCACGTGTCGCGGAAGCTTCTAGAAAGAATCAGCGACGCGATTGACGGGAGAAGGTTGGAGAAAGCGGTGGAGGATTGTTACGCGGTGGAGAGGATCTGGAAGCTTCTTGCTGATATTGAAGACGTTCATCTGATGATGGATCCAGCTGATTTCCTGAAGCTGAAGAATCAGTTATCGGTGAAATCGTCATCATACGAAACGGCGGCGTTTTGCATGCGGTCGAAGGAGTTGGTCAACGTGACGAAGATGTGTAGAGATTTGCGGCATAGAGTGCCGGAGATATTGGAAGTTGAGGTTGATCCTAAAGGCGGACCTAGGATTCAAGAGGCGGCGATGAAGCTGTATGTGGCGGAGAAGATGAGTGGGTTCGATAAGGTTCACTTGTTGCAGGCTATGCAAGCTATTGAAGTTTCTATGAAGAGATTCTTCTATGGTTACAAGCAGGTGCTGACGGTGGTGATGGGGAGTTCTGAGGCGAATGGAAACCGAGTTGGGCTGAGTTGCGATGGCGGTGACTCGTTGACTCACATGTTCCTTGAACCCACGTATTTTCCAAGTTTGGATGCTGCTAAGACTTTTCTTGGATACTTTTGGGATAATGATAACAAATGGGTGTCAGAAAATTAG 1389 0.4903 MVDLHWKLNMPNSDMSSKSPKLSISDKSSPRNNSLPLLQPLSITNDISAAAPPLCAAYDYYIRIPELRKLWESREFPNWGNEPILKPALQALEITFGFISTVLSDPRPYTNRSEWNRRLESIATQQIEIIAMLCEDEEQNPETRGTVPTAYLSSGDSKIRSYSERSLLPQLATWYKSKDVAQRILLSVECQMMRCSYTLGLGEPNLAGKPSLRYDTVCKPDEVHTLKTTPYDDRIDNYENHAVHATHQIVESWIHVSRKLLERISDAIDGRRLEKAVEDCYAVERIWKLLADIEDVHLMMDPADFLKLKNQLSVKSSSYETAAFCMRSKELVNVTKMCRDLRHRVPEILEVEVDPKGGPRIQEAAMKLYVAEKMSGFDKVHLLQAMQAIEVSMKRFFYGYKQVLTVVMGSSEANGNRVGLSCDGGDSLTHMFLEPTYFPSLDAAKTFLGYFWDNDNKWVSEN 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04285 462 Pfam Hs1pro-1 N-terminus 1 189 IPR009869 GO:0006952
Vivi3g04285 462 MobiDBLite consensus disorder prediction 11 33 - -
Vivi3g04285 462 Pfam Hs1pro-1 protein C-terminus 192 454 IPR009743 -
Vivi3g04285 462 SUPERFAMILY Indolic compounds 2,3-dioxygenase-like 214 448 IPR037217 GO:0019441|GO:0020037|GO:0046872
Vivi3g04285 462 PANTHER NEMATODE RESISTANCE PROTEIN-LIKE HSPRO1 1 458 IPR038759 -
Vivi3g04285 462 Gene3D - 212 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04285 Vivi-Chr3 76636738 76638520 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04285 - - psat:127083938 898.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g04285 3 76636738 76638520 Vivi3g04285 3 76636738 76638520 ECH
Vivi3g04285 3 76636738 76638520 Vivi7g02095 7 83004012 83005586 PCT