Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04279 ATGGCGTCTTCACGTCCCCCACCGTCGAAGTCCGTAGATCTCGACCTCACCATCGTCTCCGCCAAACATCTCAAAAACGTCAACTGGAAAAACGGCGATCTCAAACCCTACGTCGTCTTCTGGGTCGATCCCGACCGTCGTCTCGCCACCAAATCCGACGACTCCGGCAACACTTCCCCCGTCTGGAACGAACGATTCACCCTCCCTCTCTCACTTCCTCTCCCTGACTCCTACCTCACCCTCGAGATCTTCCATTCCAAACCCTCCGATACCCCCAAACCCCTCGTCGCCACCCTCCGCCTCCCCCTTAAAGACCTCCACGAACTCAACCACTCCACCATCAACCGCAAGTTTCCTGTTGTACGACCCTCCGGCCGCCCTCACGGCAAGGTTCACCTCAAGCTCGCTCTCCTCGGCCGCTCTCCTCCTCCTCCACCGCAGCAACAAACCTACGATTACACCAACCCTAATTATAATCCCAATCCTAACCCTAATCCCAACCCTAACCCTAATTCCAATCCATCCTTAGTCTATTACAGAGGATACTCCTCTTCACCTTCTCCATACCCTATACCCTACTCTTACCCTGATACCCTCCCTGGCGGTTACTATCCTGCTCCCACCGGCTATTATTCCGGTGCATCTTACCCTCCTCCACCACCGAGGCCTTTCTTTGATCGTACCGGAAGTTATGCAGCTGGGCCCAGTGGACCATCTGCCCCGCTTGAATTTTCCTCCTCGTTTGATCCGAGGCCCAAAGGCGGTAAGATGGGTCTAGGTGCTGGGCTGGCTGTTGGTGCTGTTGCAGGGGCGATGAGCGGGATTGCCCTAGAAGAGGGGATGAAGTATGAAGAGCGCAGGCTTGCGGAAATGGTTGAAAGTGATGTTGCTTCTGCTAGAGATGATTATGGTGATGCTCATTACCGAGATTATTAA 936 0.5438 MASSRPPPSKSVDLDLTIVSAKHLKNVNWKNGDLKPYVVFWVDPDRRLATKSDDSGNTSPVWNERFTLPLSLPLPDSYLTLEIFHSKPSDTPKPLVATLRLPLKDLHELNHSTINRKFPVVRPSGRPHGKVHLKLALLGRSPPPPPQQQTYDYTNPNYNPNPNPNPNPNPNSNPSLVYYRGYSSSPSPYPIPYSYPDTLPGGYYPAPTGYYSGASYPPPPPRPFFDRTGSYAAGPSGPSAPLEFSSSFDPRPKGGKMGLGAGLAVGAVAGAMSGIALEEGMKYEERRLAEMVESDVASARDDYGDAHYRDY 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04279 311 ProSiteProfiles C2 domain profile. 1 118 IPR000008 -
Vivi3g04279 311 SMART C2_3c 13 115 IPR000008 -
Vivi3g04279 311 CDD C2_SRC2_like 13 133 IPR044750 GO:0006952
Vivi3g04279 311 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 142 IPR035892 -
Vivi3g04279 311 Pfam C2 domain 13 116 IPR000008 -
Vivi3g04279 311 PANTHER INGRESSION PROTEIN FIC1 14 268 - -
Vivi3g04279 311 MobiDBLite consensus disorder prediction 137 179 - -
Vivi3g04279 311 Gene3D C2 domain 3 138 IPR035892 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04279 - - cam:101506439 399.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g04279 3 76491841 76493086 Vivi3g04279 3 76491841 76493086 ECH