Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04266 ATGGGAAAAGGAGGCGGTGAGAATAATGATCCGAACAAGGTTCATGATGATTCTGTCGAAATTCCAGATACCGCGCATCAAATTAGCAGCGATTCATGGTTTCAAGTGGCATTTGTGCTCACCAATGGAGTCAACAGTGCTTTTGTCCTTGGATATTCCGGGACCGTTATGGTTCCCTTGGGTTGGGTAGGGGGTGTAGTTGGTCTCATTCTTGCTGCGTTGGTGTCGCTTTACGCGAATGCCCTTATTGCTGATCTCCATGAATTAGGAGGGACTAGACACATTAGATATAGAGATCTTGCCGGATATGTTTACGGTAAAAAGGCATATAAACTCACATGGGCTCTCCAGTATATCAATCTTTTTATGATCAATACTGGTTTCATTATTTTGGCTGGTTCAGCCTTGAAATCTACTTACACCTTGTTTAGTGATGATGCTCAGCTGAAGCTTCCATATTGTATTGCTATAGCTGGATTTGTGTGTGCATTATTTGCCATATGTATTCCTCATCTTTCAGCTCTTGGAATTTGGTTGGCAGTTTCAACCGTCTTCGGCGTGATATACATTGCCATAGCATCTGGGCTATCAATTAAAGATGGAATACAGTCACCGCCTCGAGATTACAGCATTCCAGGAGAAGGGGCAAGTAAAATATTTGAAATTATTGGGGCGTCTGCTAACCTAGTTTTCGCATATAACACCGGCATGCTTCCTGAGATACAGGCAACAATTAAGCAGCCAGTTATGAAGAACATGATGAAATCCCTTTATTTTCAGTTTACCGTCGGAGTTGTACCATTGTACATTATAACCTTTTCAGGATATTGGGCTTATGGATCTTCCACAGAAACCTATTTACTGAATAGTACAAAAGGTCCAGTCTGGGTGAAAGCTATTGCCAATATTACAGCCTTCCTTCAATCAGTCATCGCGCTGCATATATTTGCAAGTCCGATGTATGAGTATCTGGATACTAAAAACGGAATCAAAGGAAGCGCAATGAATATTAAGAACTTGTCATATAGAATCACAGTAAGAGGCGGATACCTGGTATTTAACACATTCGTGGCGGCTCTCCTGCCTTTTCTCGGAGATTTCATGAGCCTCACGGGAGCGATTAGCACATTTCCCCTAACATTTATTCTTGCTAACCATATGTACATGGTGGCAAAAAAGAACAAACTAACAAGTTTACAGAAGCTCTGGCACTGGATCAACATTGTTTTCTTTAGCATCATGTCTATTGCAGCAGCCGTTGCAGCAGTACGGCTTATTTCTGTAGACTCCAAAACATACCATCTTTTCGCAGATATTTGA 1320 0.4159 MGKGGGENNDPNKVHDDSVEIPDTAHQISSDSWFQVAFVLTNGVNSAFVLGYSGTVMVPLGWVGGVVGLILAALVSLYANALIADLHELGGTRHIRYRDLAGYVYGKKAYKLTWALQYINLFMINTGFIILAGSALKSTYTLFSDDAQLKLPYCIAIAGFVCALFAICIPHLSALGIWLAVSTVFGVIYIAIASGLSIKDGIQSPPRDYSIPGEGASKIFEIIGASANLVFAYNTGMLPEIQATIKQPVMKNMMKSLYFQFTVGVVPLYIITFSGYWAYGSSTETYLLNSTKGPVWVKAIANITAFLQSVIALHIFASPMYEYLDTKNGIKGSAMNIKNLSYRITVRGGYLVFNTFVAALLPFLGDFMSLTGAISTFPLTFILANHMYMVAKKNKLTSLQKLWHWINIVFFSIMSIAAAVAAVRLISVDSKTYHLFADI 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04266 439 PANTHER OS05G0424000 PROTEIN-RELATED 28 422 - -
Vivi3g04266 439 Pfam Transmembrane amino acid transporter protein 31 422 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04266 Vivi-Chr3 76203297 76206310 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04266 57 439 Organic Solute Cotransporters AT2G39890 71.279 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04266 K26247 - gmx:100778997 679.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g04266 3 76203297 76206310 Vivi3g04266 3 76203297 76206310 ECH
Vivi3g04266 3 76203297 76206310 Vivi7g02049 7 82462873 82465022 PCT