Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04243 ATGGAGCAAGATATGGAGAAGAGAAAAGGAGAAAAAAGTGAACAAAGTAATGAAGAAAAATGGGTGCATGATGGTTCTTTTGATTATAAAGGAAGAGTTCCTCTTCGCGCTTCGACCGGTGCGTGGAAAGCTTCTCTCATTGTCATCATGGTTGAAATTAGTGAAAGGATGAGTCACTATGGAATATCAATGAACCTTATAACTTACCTGACTGAAGTGATTCATGAAGACCTCAAAACAGCTGCTAAGAATGTAAACAACTGGTATGGAGTAACAACTCTAATGCCGCTGATAGGAGGATTTGTCGCTGATGCGTACACTGGTCGGTTTTATATGGTTCAATTGTCATCCCTAATATATATGATGGGGCTATGCCTGTTGACAATGTCTCAATACATCCCGAGTCTAAGGTCATGCAATACGGAGATATGTCAACGGCCGAGGAAAGTTCACGAGGTGGTTTTCTTTCTTGCGATTTATGCTAAATCCTTGGGAACGGGAGGATTTAGGCCATGCTTACAAAGCTTTGGCGCTGATCAATTTGATGATGGTCATTTGGAAGAAATGAAGAAGAAACTGTCTTTCTTCAACTGGTGGAACTTTGGATTATGCTTTGCAGTGTTGATTAGTTCAACAGTGATTGTTTATGTTCAAGATGTTGTCAACTGGGGAGTTTCATCTCTATTACTTACTAGCTTTATGGCTATTGCTGTCATAACTTTCTGGATAGGCAAGCCGTTTTACAGGTACCGAAAGACGGAAGGAAACCCTCTATTGCCGATTTTACAGGTCCTAGTTGCGGCCATAAGGAAAAGGGGTTTGCATTGTCCTTCAAATCCGGATTTATTGTATCGAGTTCCAATTTCAGATCAGTCTCAAGGAAGACTTCTGAGCCATACCAGAAGATTCAGGTTTCTTGACAAGGCTGCAATAATCGAAGAGGAATACGTTGAGCAGGAAGTAAATCCATGGAGATTAGCAACATTGACAAGAGTGGAGGAGACAAAGCTTGTATTGAACATAGTTCCAATATGGATAACTTTGTTAGCATCTGGAGCATGTGGAGCACAAGGCACAACTTTCTTTGTCAGACAAGCAGCTGCTACAGATTTAAACATAGGCAACGGTTTCAAAATTCCGCCAGCTTCCCTAAATTCTGTTTCTGCCATTGGCACGTTAATCGGTGTCCCCATTTACGATAAGGTTTTTGTTCCAATAATGAGGAAAATCACCGGAAACGAAAGGGGGATCAGTATCCTTCGCAGGATAAACATTGGCTTGATACTCTCCGCCATGATAATGGTTCTCTCAGCCTTAGTAGAAGTTAAGAGACTTAGAATGCTTGAGCACGAAGTTTCGAGAACAGGGGAAACAGAGTTAAACACTATGAGTGTGTACTGGTTAATACCACAGAACTTGATCGCTGGCGTCGGGGATGCGTTTTCTATGGTTGGTATGCAAGAGTATTTCTACGACGAAGTTCCCGACTCAATGAGAAGCTTGGGATTGGCATTGTATTTTAGTGTGTTTGGAATTGGAAGCTTCTTAAGCACTTTTTTAATCATTGCGGTGGACAATGTAACGGCGAAGAGTGGCAAAAGTTGGATCGGGAAGGATATAAACTCGAGCCGTTTGGATAAGTTTTATTGGTTGTTGGCAGTTATAAGTTTTTTGAATGTGTTAGTCTTTGTCTTCATAGAAAAGAGGTACATTTATAAGAAAGTACAGATGAAAGCTATGGAAACCAATGGTTACAAGAGTGATGATGATGACAGCATCATGGAGGATACTAAGGTCTAG 1800 0.41 MEQDMEKRKGEKSEQSNEEKWVHDGSFDYKGRVPLRASTGAWKASLIVIMVEISERMSHYGISMNLITYLTEVIHEDLKTAAKNVNNWYGVTTLMPLIGGFVADAYTGRFYMVQLSSLIYMMGLCLLTMSQYIPSLRSCNTEICQRPRKVHEVVFFLAIYAKSLGTGGFRPCLQSFGADQFDDGHLEEMKKKLSFFNWWNFGLCFAVLISSTVIVYVQDVVNWGVSSLLLTSFMAIAVITFWIGKPFYRYRKTEGNPLLPILQVLVAAIRKRGLHCPSNPDLLYRVPISDQSQGRLLSHTRRFRFLDKAAIIEEEYVEQEVNPWRLATLTRVEETKLVLNIVPIWITLLASGACGAQGTTFFVRQAAATDLNIGNGFKIPPASLNSVSAIGTLIGVPIYDKVFVPIMRKITGNERGISILRRINIGLILSAMIMVLSALVEVKRLRMLEHEVSRTGETELNTMSVYWLIPQNLIAGVGDAFSMVGMQEYFYDEVPDSMRSLGLALYFSVFGIGSFLSTFLIIAVDNVTAKSGKSWIGKDINSSRLDKFYWLLAVISFLNVLVFVFIEKRYIYKKVQMKAMETNGYKSDDDDSIMEDTKV 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04243 599 Pfam POT family 113 531 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vivi3g04243 599 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 40 572 - -
Vivi3g04243 599 SUPERFAMILY MFS general substrate transporter 37 569 IPR036259 -
Vivi3g04243 599 Gene3D MFS general substrate transporter like domains 13 580 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04243 Vivi-Chr3 75462833 75465330 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04243 5 576 Organic Solute Cotransporters AT3G53960 53.356 0.0 656
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04243 K26562 - gmx:102660397 853.203