Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04204 ATGGCTCTTTTTCTCAACGCCTCCTTGTCTTCCACTTCCAAACCTCATCACCACCGTCTCTCCTTTCCAACCACCTCCGCAACACCTCTTCCTCCGTTTCTGAGAATCAATCCAAAGCAACCTCAACAACCTCCTCCAAAACTCACATTATCACTCGGTGAATCCATCTCCAGTGCTACCATTGTTGCTCTTCTTTCTGCTTCTCTCTTCTTTGTTCATCCCGCACTAGCATTCAAGGGTGGAGGGCCATATGGACAAGGGGTTACTAGGGGACAAGATCTTTCTGGGAAAGACTTCAGTGGCAAGACACTCATCAAACAAGACTTCAAAACGTCTATACTGCGACAAGCCAATTTTAAAGGTGCAAAATTGTTAGGTGCTAGCTTCTTTGATGCTGATTTAACAGGTGCTGATCTTTCGGATGCTGATCTTAGAAGTGCTGATTTTTCCCTGGCAAATGTTACAAAGGTAAATTTGAGCAATGCTAACTTGGAAGGTGCACTTGTAACCGGAAATACATCTTTTAAGGGATCAAATATTACAGGCGCCGATTTTACTGATGTGCCACTAAGAGAAGATCAACGCGTATACCTCTGCACAATTGCTGATGGAGTGAACTCAACAACTGGAAATGCTACGCGTGATACATTGCTGTGCGAATAG 663 0.4419 MALFLNASLSSTSKPHHHRLSFPTTSATPLPPFLRINPKQPQQPPPKLTLSLGESISSATIVALLSASLFFVHPALAFKGGGPYGQGVTRGQDLSGKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRSADFSLANVTKVNLSNANLEGALVTGNTSFKGSNITGADFTDVPLREDQRVYLCTIADGVNSTTGNATRDTLLCE 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04204 220 Gene3D - 77 220 - -
Vivi3g04204 220 SUPERFAMILY Pentapeptide repeat-like 88 190 - -
Vivi3g04204 220 FunFam thylakoid lumenal 15 kDa protein 1, chloroplastic 77 220 - -
Vivi3g04204 220 Pfam Pentapeptide repeats (8 copies) 112 150 IPR001646 -
Vivi3g04204 220 PANTHER THYLAKOID LUMENAL 15 KDA PROTEIN 1, CHLOROPLASTIC 11 220 IPR044213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04204 Vivi-Chr3 73998804 74000832 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04204 - - gmx:100500352 326.25