Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04202 ATGGGACGTCTAAAGCTGCAAACGGGTATCAACTCAATAGAGGAGGAGGAACCAGAAGAATGTGATGCTGCCTGTCCCAGTAGAACAACTTTATCGTGCATGATAAATTCAGAAATCGGTGCTGTTTTGGCAGTAATGAGAAGAAATGTAAGATGGGGAAGTCGTTATATGTCAGGCGATGATCATCTGGAACACTCTCTTATTCAGTCTTTTAAGGCATTAAGGAGGCAAATTTTTTCATGGAATCACCATCAGTGGCAGTCTATCAACCCCACACTGTATCTACAGCCTTTTCTAGATGTGATTCGGTCTGATGAAACTGGTGCAGCAATTACAGGTGTTTCTTTGTCATCTGTTTACAAGATCTTGACTCTTGATGTGATTGATCATAATACTGTCAACGTTGAGGATGCCATTCACTTGGTGGTTGATGCTGTCACTAGCTGCAGATTTGAGGTCACTGATACTTCTTCTGAAGAAGTTGTTTTAATAAAGATACTACAAGTTCTTCTAGCGTGTATGAAAAGTAAAGCGTCTGTAATGCTGAGTAACCAACATGTTTGCACCATAGTGAATACTTGTTTCCGTATAGTTCATCAAGCTGGAAACAAAGGTGAGTCTTTGCAGCAGATATCACGGTACACAATGCATGAACTTGTTAGGTGTATTTTTTCTCACCTTCAAGATGTTGACAACACAGACCATGCATTAGTTAATGGAAGCTCTAATTTGAAACAGGAGACTGGAAGCCTAAATAACGAGTACGCTTTCGGAAGTAGAAAGTTGGAGAATGGCAGCATGAGTTCTGAATATGATAATCAGCCGCAACCCACAAACTTTGCTTCAAATGCTGCAAGTGCTGTGACTGTAACTATGATGGATGAAAACTCAGCGATAGCTCTTACTGGCAAGGAAGGTGCATCATATGATGTGCATCTCATGACTGAACCATACGGTGTTCCTTGCATGGTGGAAATATTTCACTTTTTGTGTTCTTTGCTGAACGTTATTGAGAATTCGGAATTGGGTCCTAGATCAAACACTATAGCATTTGATGAAGACGTACCCCTTTTTGCTTTAACTTTAATCAATTCGGCTATAGAACTTGGAGGGCCTTCTATTCACCGTCACCCAAGGTTGCTAAGCTTAATTCAGGATGAACTTTTTCATAATCTGATGCAATTTGGTTTGTCAATGAGTCCGCTCATACTTTCAATGGTGTGTAGCATTGTTCTCAATCTTTATCATCATCTTCGTACAGAACTCAAATTGCAGCTAGAAGCATTTTTTTCTTGTGTCATTTTGAGACTTGCACAAAGCAGATATGGGGCTTCATACCAGCAGCAAGAGGTAGCCATGGAAGCCCTTGTCGACTTCTGCAGGCAAAAGACATTTATGGTTGATATGTATGCTAACTTTGATAGCGACATAACTTGCAGCAATGTCTTTGAAGACCTCGCTAATTTATTGTCAAGAAGTGCATTTCCTGTGAACTGTCCATTGTCTGCCATGCATATTCTTGCTTTGGATGGTCTTATTGCTGTTATACAGGGAATGGCTGAAAGGATAACCAATGGATCTGCTAACTCAGAATATTCTCCTGTGAATCTTGAAGAGTATATTCCATTCTGGATGGTTAAATGTGAAAATTATGGTGATCCAAATCATTGGGTTACTTTCACCCGCCGCAGAAAGTACATAAAGAGAAGATTGATGATTGGTGCTGACCACTTCAATCGTGATCCTAAGAAAGGTTTGGAGTTTCTCCAGGGAACACATCTCTTGCCTGACAAACTTGATCCCCAAAGTGTTGCTTGCTTTTTCAGATACACTGCTGGGTTGGATAAGAATCTTGTTGGTGATTTTCTTGGAAATCATGACGAATTTTGTGTTCAGGTTCTTCATGAATTTGCTGGAACATTTGATTTCCAGGATATGAACTTAGATACAGCCCTTCGTTTATTTCTGGAGACTTTCAGATTGCCTGGAGAGTCACAAAAGATACATAGGGTGCTTGAAGCTTTCTCTGAGAGATACTATGAACAGTCACCACATATCCTAGCTAACAAGGATGCTGCTCTTGTGTTATCATACTCAATGATAATGCTTAATACAGACCAGCACAACGTGCAGGTTAAAAAGAAGATGACAGAAGAGGATTTTATCAGGAATAATAGGCATATAAATGGAGGCAATGATCTTCCTCGAGAATTCCTATCAGAACTTTATCATTCAATTTGTAAGAATGAAATCCGTACAACCCCTGAACAAGGTGTTGGGTTTCCTGAAATGACACCAAGTCGATGGATCGATCTAATGCATAAGTCAAAGAAAACTGCTCCATTTATTGTATCTGGTTCCAAGGCTTACCTTGATCATGATATGTTTGCCATAATGTCAGGGCCAACTATTGCTGCTATCTCTGTTGTATTCGATCACGCCGAACATGAAGAGGTATACCAAACATGTATGGACGGATTCTTAGCTATTGCTAAGATTTCTGCTTGCCATCATCTTGAAGATGTTCTTGATGATCTTGTAGTGTCACTTTGTAAGTTCACTACACTTTTAAACCCATCGTTGGTTGAGGAACCAGTCCTTGCCTTTGGAGATGACATGAAAGCAAGAATGGCAACTGTAACAGTGTTCACTATTGCAAACAGGTATGGTGATTACATACGCACAGGTTGGAGAAATATTCTGGATTGCATTTTAAGATTGCACAAGCTAGGTCTTCTTCCTGCCCGTGTTGCCAGTGATGCAGCTGACGATTCAGAGCTTTCTGCTGAAACTGTGCACGGCAAGCCTATTGTGAACTCTTTATCTTCAGCTCATATGCAATCGATTGGCACACCAAGGAGATCCTCAGGATTGATGGGTAGGTTTAGTCAACTCTTATCTCTTGACACCGAGGAGCCAAGATCACAACCTACTGAACAACAACTTGCTGCTCATCAGCGCACTCTTCAAACAATACAGAAGTGTCACATTGACAGCATATTTACTGAGAGTAAATTTCTGCAAGCTAAATCTCTCGAACAGCTTGCAAAAGCGCTCATTTGGGCTGCAGGTCGACCTCAAAAAGTGAACAGCACGCCAGAGGATGAAGATACAGCAGTTTTCTGCCTGGAGTTGCTGATTGCAATCACTTTGAATAACAGGGATAGAATAGGGATTCTTTGGCCGGGTGTATATGACCACATATCCAATATTGTTCAGTCAACTGTAATGCCCTGTGCCTTAGTAGAAAAGGCTGTGTTTGGACTCCTAAGGATTTGCCAGCGATTGCTCCCATACAAGGAAAACATTGCCGACGAACTTTTGAGATCGTTACAACTTGTCTTAAAGCTTGATGCCCGGGTTGCTGATGCTTACTGTGAACAGATTACTCAGGAAGTCAGCCGCCTTGTGAAGGCAAATGCTTCTCACATAAGATCCCAGTTAGGATGGCGTACAATTACATCACTACTTTCCATCACTGCTAGGCATATTGAAGCATCTGAGGCTGGATTTGATACACTTCTTTTCATTATGTCAGATGGTGCCCACTTGCTTCCAGCTAATTATGTTCTCTGCGTAGATACTGCAAGGCAGTTTGCTGAGTCTCGTGTTGGCCAAGCTGAGCGATCTGTGCGGGCACTAGATCTAATGACAGGGTCAGTCAACTGCTTGTCCCGGTGGACTAGCGAGGCCAAGGAGACAATGGAGGAGGAGCAAATGTCTAAGTTGTCTAAGGATATTGGAGACATGTGGTTGATATTAGGACAGGGTTTAAGGAAAGTGTGTTTAGACCAGAGAGAGGAGGTTAGAAATCATGCTTTATTATCTTTGCAGAAGTGCTTGACAGGAGCAGATGACATTTATCTCCCATATGGTAAGTGGTTAGACTGTTTCGATCTTGTGATCTTCACCGTGCTTGATGATCTTCTTGAGATTTCACAGGGACACTCTCAGAAGGACTACCGCAATATGGAGGGCACCCTTATCTTAGCAGTAAAGCTCCTGTCCAAAGTTTTTCTTCAATCACTCCCTGTTTTATCACAATTAACAACCTTCTGCAAGCTATGGTTAGGTGTACTGACCAGAATGGAAAAATATATGAAGGTGAAAGTTAGGGGGAAAAGAAGTGAGAAGCTTCAAGAAACAGTGCCCGACCTGCTTAAAAGCTCTTTGCTTTCTATGAAAATGAGAGGTATACTGGCCCAGAGGAGTGCATTGGGTGGTGATAGTCTTTGGGAATTAACTTGGCTTCATGTGAACAACATTTCACTTTCGTTGCAACTTGAGGTATTCCCTGAGCAGGATTCTGAACATTTGCAGCACAAACAGGGTGAATCAGTAGGAGGTTTGGCACCTGAAGAAAAGGTTTCCGTTCCTTCAAGTGGAACCACAAGCCTTGAAGATACTGGTTTTGTTGGTTAA 4422 0.4163 MGRLKLQTGINSIEEEEPEECDAACPSRTTLSCMINSEIGAVLAVMRRNVRWGSRYMSGDDHLEHSLIQSFKALRRQIFSWNHHQWQSINPTLYLQPFLDVIRSDETGAAITGVSLSSVYKILTLDVIDHNTVNVEDAIHLVVDAVTSCRFEVTDTSSEEVVLIKILQVLLACMKSKASVMLSNQHVCTIVNTCFRIVHQAGNKGESLQQISRYTMHELVRCIFSHLQDVDNTDHALVNGSSNLKQETGSLNNEYAFGSRKLENGSMSSEYDNQPQPTNFASNAASAVTVTMMDENSAIALTGKEGASYDVHLMTEPYGVPCMVEIFHFLCSLLNVIENSELGPRSNTIAFDEDVPLFALTLINSAIELGGPSIHRHPRLLSLIQDELFHNLMQFGLSMSPLILSMVCSIVLNLYHHLRTELKLQLEAFFSCVILRLAQSRYGASYQQQEVAMEALVDFCRQKTFMVDMYANFDSDITCSNVFEDLANLLSRSAFPVNCPLSAMHILALDGLIAVIQGMAERITNGSANSEYSPVNLEEYIPFWMVKCENYGDPNHWVTFTRRRKYIKRRLMIGADHFNRDPKKGLEFLQGTHLLPDKLDPQSVACFFRYTAGLDKNLVGDFLGNHDEFCVQVLHEFAGTFDFQDMNLDTALRLFLETFRLPGESQKIHRVLEAFSERYYEQSPHILANKDAALVLSYSMIMLNTDQHNVQVKKKMTEEDFIRNNRHINGGNDLPREFLSELYHSICKNEIRTTPEQGVGFPEMTPSRWIDLMHKSKKTAPFIVSGSKAYLDHDMFAIMSGPTIAAISVVFDHAEHEEVYQTCMDGFLAIAKISACHHLEDVLDDLVVSLCKFTTLLNPSLVEEPVLAFGDDMKARMATVTVFTIANRYGDYIRTGWRNILDCILRLHKLGLLPARVASDAADDSELSAETVHGKPIVNSLSSAHMQSIGTPRRSSGLMGRFSQLLSLDTEEPRSQPTEQQLAAHQRTLQTIQKCHIDSIFTESKFLQAKSLEQLAKALIWAAGRPQKVNSTPEDEDTAVFCLELLIAITLNNRDRIGILWPGVYDHISNIVQSTVMPCALVEKAVFGLLRICQRLLPYKENIADELLRSLQLVLKLDARVADAYCEQITQEVSRLVKANASHIRSQLGWRTITSLLSITARHIEASEAGFDTLLFIMSDGAHLLPANYVLCVDTARQFAESRVGQAERSVRALDLMTGSVNCLSRWTSEAKETMEEEQMSKLSKDIGDMWLILGQGLRKVCLDQREEVRNHALLSLQKCLTGADDIYLPYGKWLDCFDLVIFTVLDDLLEISQGHSQKDYRNMEGTLILAVKLLSKVFLQSLPVLSQLTTFCKLWLGVLTRMEKYMKVKVRGKRSEKLQETVPDLLKSSLLSMKMRGILAQRSALGGDSLWELTWLHVNNISLSLQLEVFPEQDSEHLQHKQGESVGGLAPEEKVSVPSSGTTSLEDTGFVG 1473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04202 1473 Gene3D - 644 760 IPR023394 -
Vivi3g04202 1473 FunFam ARF guanine-nucleotide exchange factor GNOM-like 643 761 - -
Vivi3g04202 1473 MobiDBLite consensus disorder prediction 1457 1473 - -
Vivi3g04202 1473 SUPERFAMILY ARM repeat 163 1316 IPR016024 -
Vivi3g04202 1473 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 69 1435 - -
Vivi3g04202 1473 CDD Sec7 568 751 IPR000904 GO:0005085|GO:0032012
Vivi3g04202 1473 ProSiteProfiles SEC7 domain profile. 560 749 IPR000904 GO:0005085|GO:0032012
Vivi3g04202 1473 SMART sec7_5 564 751 IPR000904 GO:0005085|GO:0032012
Vivi3g04202 1473 FunFam ARF guanine-nucleotide exchange factor GNOM 561 643 - -
Vivi3g04202 1473 Pfam Sec7 domain 568 751 IPR000904 GO:0005085|GO:0032012
Vivi3g04202 1473 MobiDBLite consensus disorder prediction 1441 1473 - -
Vivi3g04202 1473 Gene3D - 561 643 - -
Vivi3g04202 1473 SUPERFAMILY Sec7 domain 565 754 IPR035999 GO:0005085|GO:0032012
Vivi3g04202 1473 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 321 482 IPR032691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04202 Vivi-Chr3 73971659 73980058 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04202 K18443 - gmx:100780239 2684.83