Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04186 ATGACAGCAGTAGAAGCACAAAGTAGAGGAGGACAGAGATGGTCTCTCACAGGAATGACAGCTCTTGTAACCGGCGGCACTCGTGGAATCGGGCATGCCATTGTGAATGATCTAGCTGCATTTGGTGCTACTGTCTACACTTGTTCAAGAACTGAATCAGAGCTCAACAAGTGCTTACAAGAATGGCAAACTCTGGGCTTTTCAGTCACAGGGTCTGTCTGTGATGTAAGCTCTCGACCACAGAGAGAGAACCTTGTTCAACAAGTTTCCTCCACCTTCAATGGCAAACTCAACATATTTGTGAATAACGTTGGAACAAACTTTCGAAAGCCAACTATCGAATACACTGCTGAAGATTATTCAGAGCTGATGACAGTTAATTTCGACTCATCATTCCATCTATGCCAACTTGCATATCCTCTTCTAAAACAATCTGGAAATGGAAGCATTGTGTTCATTTCATCTGTTGCAGGTGTTGTGAGCTTAGGTACTGGATCTGTCTATGCAGCAAGTAAAGCTGCGATTAATCAGCTTACGAAAAATCTGGCCTGTGAATGGGCACAAGACAACATAAGGAGCAATTGCGTTGTACCGTGGGCGACCAGAACTCCACTGGTTGAACATCTATTTAAAAACCAGAAGTTTGTGGATGATATTATGGCTAGAACTCCTCTTAAGCGGATTGCAGAACCCGAAGAAGTGTCGTCTTTGGTGAATTTCCTTTGTTTGCCTGCTGCATCTTATATCACTGGACAAGTTATTTGTGTTGATGGAGGGCTAACTGTGTTTGGATTTCAACCCAGCATGAGAATTACATGA 819 0.431 MTAVEAQSRGGQRWSLTGMTALVTGGTRGIGHAIVNDLAAFGATVYTCSRTESELNKCLQEWQTLGFSVTGSVCDVSSRPQRENLVQQVSSTFNGKLNIFVNNVGTNFRKPTIEYTAEDYSELMTVNFDSSFHLCQLAYPLLKQSGNGSIVFISSVAGVVSLGTGSVYAASKAAINQLTKNLACEWAQDNIRSNCVVPWATRTPLVEHLFKNQKFVDDIMARTPLKRIAEPEEVSSLVNFLCLPAASYITGQVICVDGGLTVFGFQPSMRIT 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04186 272 Gene3D - 10 264 - -
Vivi3g04186 272 Pfam Enoyl-(Acyl carrier protein) reductase 27 261 - -
Vivi3g04186 272 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 155 183 IPR020904 GO:0016491
Vivi3g04186 272 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 18 263 IPR036291 -
Vivi3g04186 272 PRINTS Glucose/ribitol dehydrogenase family signature 20 37 IPR002347 -
Vivi3g04186 272 PRINTS Glucose/ribitol dehydrogenase family signature 95 106 IPR002347 -
Vivi3g04186 272 PRINTS Glucose/ribitol dehydrogenase family signature 168 187 IPR002347 -
Vivi3g04186 272 PRINTS Glucose/ribitol dehydrogenase family signature 224 244 IPR002347 -
Vivi3g04186 272 PRINTS Glucose/ribitol dehydrogenase family signature 189 206 IPR002347 -
Vivi3g04186 272 PRINTS Glucose/ribitol dehydrogenase family signature 142 158 IPR002347 -
Vivi3g04186 272 PANTHER TROPINONE REDUCTASE 12 263 IPR045000 GO:0016491
Vivi3g04186 272 FunFam Short-chain dehydrogenase reductase 6 265 - -
Vivi3g04186 272 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 156 IPR002347 -
Vivi3g04186 272 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 95 106 IPR002347 -
Vivi3g04186 272 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 168 187 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04186 Vivi-Chr3 73732707 73734594 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04186 12 267 Miscellaneous Gene Families AT2G29290 61.628 1.60e-118 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04186 K08081 - gmx:100527615 466.463