Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04124 ATGTCCGTCGCATGTGGCGTAGAGTGTGTTTTAGTCTTCGGCTGCGCGCGTTGGCTATGGAAACGCTGCACATACATCGGCTCCTACGACAGCGCCACGTGGCCATCCGCCACCGCCGTCGAATTCGAGCCGGTGCCACGCGTCTGCAGAATCATCCTCGCTATCTACGAACCCGATCTCAAGAACCCCCAGCATTACCAGCCTGCAAACGGGTATCGTTTGAATCCCGACTGGGTTGTAAAGCGCGTGAGTTATCTAGAAACTGAGGGCCACGCGCCGCCGTATATAATCTACGTCGATCATGATAATCGCGAGATTGTGATGGCTGTGCGTGGACTTAATTTAGCTAAGGAGAGTGACTATAAGCTGCTGTTGGATAATAAACTGGGGAGACAGATGTTTGATGGGGGGTATGTTCATCATGGTTTGTTGAAATCTGCGGTTTGGTTGTTGAATAAGGAATCGGAGACGTTGAAGAGGTTGTGGGAGGAGAATGGGAGTGAGTATGGGATGGTTTTTGCGGGGCATTCGTTGGGGTCTGGTGTGGTTTCTTTGCTGAGTATTCTTGTTGTGAATCATAGGGAGCGTTTGGGTGGGATTCCGAAAGAGAAGATTAGGTGTTATGCTATTGCTCCGGCAAGGTGTATGTCGCTTAATTTGGCGGTTAAATATGCTAATGTTATTCATTCCATTGTGTTGCAGGATGATTTCTTGCCAAGAACAGCGACTCCATTGGAAGATATATTCAAATCAATATTCTGCTTGCCTTGCTTATTATTCTTGGTTTGCTTGAGGGATACCTTCATACCCGAGGATCGAAAGCTAAGAGATCCGAGAAGACTTTACGCACCTGGACGAATGTACCATATTGTGGAAAGAAAATTTTGCAGATGTGGAAGATTTCCTCCTGAAGTGAGGACTGCTATTCCTGTTGATGGAAGATTTGAGCATATTGTCTTGTCCTGCAACACAACTGCCGATCATGCAATTATTTGGATTGAAAGGGAGGCAGAGAAAGCCTTACAATTAATGAAGGACCAAGACAGCATCAAAACTGTGACAGTCCCACCAACGGTACAAAAGTTCGAGAGATTGAAGACGATAGAAAAAGAGCATAAAGATGCTCTTGAAAGGGCTGTAAGCTTAAATGTACCTCATGCAGTGGACACTGCAGAGAAAGAACCATCTGGAAACAATGAAGGTGAGGCAGCATCCACTAGTAATGGCAACAAAGAAGCCGAAGCCGCCTCAAGTACTGAATCAAAACCTAGTGGTGGAAGATTAAATTGGGAAGAGGTTGTTGAAAAGCTATTGAAGAAGAATAAAACAGGAGACGAACATATTGAAGAGGATACAAATGTCCCACATTGA 1371 0.4551 MSVACGVECVLVFGCARWLWKRCTYIGSYDSATWPSATAVEFEPVPRVCRIILAIYEPDLKNPQHYQPANGYRLNPDWVVKRVSYLETEGHAPPYIIYVDHDNREIVMAVRGLNLAKESDYKLLLDNKLGRQMFDGGYVHHGLLKSAVWLLNKESETLKRLWEENGSEYGMVFAGHSLGSGVVSLLSILVVNHRERLGGIPKEKIRCYAIAPARCMSLNLAVKYANVIHSIVLQDDFLPRTATPLEDIFKSIFCLPCLLFLVCLRDTFIPEDRKLRDPRRLYAPGRMYHIVERKFCRCGRFPPEVRTAIPVDGRFEHIVLSCNTTADHAIIWIEREAEKALQLMKDQDSIKTVTVPPTVQKFERLKTIEKEHKDALERAVSLNVPHAVDTAEKEPSGNNEGEAASTSNGNKEAEAASSTESKPSGGRLNWEEVVEKLLKKNKTGDEHIEEDTNVPH 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04124 456 Gene3D alpha/beta hydrolase 35 252 IPR029058 -
Vivi3g04124 456 Pfam Lipase (class 3) 107 242 IPR002921 GO:0006629
Vivi3g04124 456 MobiDBLite consensus disorder prediction 399 425 - -
Vivi3g04124 456 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 450 - -
Vivi3g04124 456 CDD Lipase_3 41 240 - -
Vivi3g04124 456 SUPERFAMILY alpha/beta-Hydrolases 42 243 IPR029058 -
Vivi3g04124 456 Pfam Lipase 3 N-terminal region 7 64 IPR005592 GO:0016042
Vivi3g04124 456 MobiDBLite consensus disorder prediction 382 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04124 Vivi-Chr3 72332053 72335528 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04124 1 343 Miscellaneous Gene Families AT5G37710 75.510 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04124 - - gmx:100798831 738.799