Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04123 ATGTTTATGCATTTTCTTCTTCTGCTTCTTTTTGCAGTGCCAGTGTTCAATGTTGCAGCCGATGAAGAACCATTCATTGGAGTCAACATTGGCACAGATCTTTCAGACATGCCTCACCCTACTCAAGTAGTTGCATTGCTCAAAGCTCAACAAATTCGACATGTTCGGCTTTATAACGCCGACCAAGCTATGCTAACCGCGTTATCAAAATCAGGAGTTCAAGTTGTTATCTCTGTTCCAAATGAAGAACTCTTAGCAATTGGTCAATCGAATTCCACAGCTGCGAATTGGGTTTCTCGCAATGTGTTGGCATATTATCCATCCACAAATATCACATCAATTTGTGTTGGTTCTGAGGTTTTAACCACACTCCCAAATGCAGCAAAGCTCTTAGTCAATGCACTTAAGTACATTCATTCAGCCCTTGTCGCGTCGAAACTCGATTCCAAAATCAAAGTTTCTACGCCGCTTCCTTCTACCATCATACTTGATTCATTTCCACCTTCACAGGCCTTTTTCAACACCTCAATGAATCAAGTCTTGATTCCAATGCTTGATTTCTTGCAATCCACTCAATCTTATCTCATGCTTAACGTTGATCCTTACTATGATTACATGGAATCAAATGGCGCAATCCCTTTGGAGAATGCGCTCTTTAAGCCAATTCCACCAAACAAAGAATCTATTGATTCCAACACACTTCTCCACTACACCAACGTGTTTGACGCTGTCGTCGATGCAGCTTATTTCGCGATGTCATATCTGAATTTCACCAACATTCCTGTGGTAGTAACGGAAACCGGTTGGCCTTCGAAAGGTGGTTCTAATGAGCCTGATGCAACACTAGACAATGCTAATGCTTACAACAGCAACTTGATCAGGCATGTTTTAAACAAAACCGGAACACCGAAACGTCCTGGAATTAGCGTCAGCACTTACATCTATGAGCTCTACAATGAGGACACAAAGGCAGGAGCTTTGTCAGAGAAAAACTGGGGACTATTTGATTCAAATGCTGTGCCTGTTTATGTTTTGCAATTGACAGGTTCAGGAGCAGTTTTGGCAAATGATACAAGTAAAGAAACCTATTGCATTGCTAAAGATGGTGCTGATCCAAAGATGTTGCAGGCTGGAATAGATTGGGCTTGTGGACCTGGAAAAGTGGATTGTTCTCCATTGTTGCAGGGAAAACCATGTTATGAACCTGATAGTGTTGTTGCTCATGCTAACTATGTTTTTGATAGTTATTATCATCAAATGGGAAAGTCTAGTGAGTCTTGTGATTTCAAGGGCATGGCTACTATCTCCACTTCTGATCCAAGTCATGGTTCTTGTATATTTTCAAGAAGTTTTGGAAGAAATGGTATCTTCTCTAATGCTCCTGCACCATCACCAAATTCCTCAGAATCTTCTGCATGTGAGTTGGGAGCTAGAAGCTTTATAATCATGATTGGACTTGTAATATGGGGAGTGGTTTTGCTATAA 1485 0.4101 MFMHFLLLLLFAVPVFNVAADEEPFIGVNIGTDLSDMPHPTQVVALLKAQQIRHVRLYNADQAMLTALSKSGVQVVISVPNEELLAIGQSNSTAANWVSRNVLAYYPSTNITSICVGSEVLTTLPNAAKLLVNALKYIHSALVASKLDSKIKVSTPLPSTIILDSFPPSQAFFNTSMNQVLIPMLDFLQSTQSYLMLNVDPYYDYMESNGAIPLENALFKPIPPNKESIDSNTLLHYTNVFDAVVDAAYFAMSYLNFTNIPVVVTETGWPSKGGSNEPDATLDNANAYNSNLIRHVLNKTGTPKRPGISVSTYIYELYNEDTKAGALSEKNWGLFDSNAVPVYVLQLTGSGAVLANDTSKETYCIAKDGADPKMLQAGIDWACGPGKVDCSPLLQGKPCYEPDSVVAHANYVFDSYYHQMGKSSESCDFKGMATISTSDPSHGSCIFSRSFGRNGIFSNAPAPSPNSSESSACELGARSFIIMIGLVIWGVVLL 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04123 494 Pfam Glycosyl hydrolases family 17 26 346 IPR000490 GO:0004553|GO:0005975
Vivi3g04123 494 Pfam X8 domain 363 434 IPR012946 -
Vivi3g04123 494 Gene3D - 356 454 - -
Vivi3g04123 494 Gene3D Glycosidases 25 351 - -
Vivi3g04123 494 SMART X8_cls 362 447 IPR012946 -
Vivi3g04123 494 ProSitePatterns Glycosyl hydrolases family 17 signature. 260 273 IPR000490 GO:0004553|GO:0005975
Vivi3g04123 494 FunFam Glucan endo-1,3-beta-glucosidase 4 357 451 - -
Vivi3g04123 494 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 11 435 IPR044965 GO:0004553|GO:0005975
Vivi3g04123 494 FunFam Glucan endo-1,3-beta-glucosidase 3 25 350 - -
Vivi3g04123 494 SUPERFAMILY (Trans)glycosidases 26 345 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04123 Vivi-Chr3 72326196 72328947 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04123 20 474 Glycoside Hydrolase AT1G66250 70.897 0.0 700
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04123 K19891 - gmx:100799965 788.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g04123 3 72326196 72328947 Vivi3g04123 3 72326196 72328947 ECH