Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04112 ATGGTAGCTTTAGTTTCTCAAGAAAATGTCGTAACATTGGTTTCTCGTACCGGTCGAGAGTTACAACGTTATAGAAAAGGTCGTCGTCAAGTTGTCGGATGTATACCATACAGATTCAAGATTGGAGAGAAAAAATCATTGGATGTTTTGGATGAATTGGAAGTGCTTGTCATAAGTTCTCAAAAAGGAAAAGGGATGCTATTTCCTAAGGGAGGTTGGGAGTTAGATGAATCTCAAAAGGAGGCAGCTATGAGAGAAACTATGGAGGAAGCTGGTGTAAAAGGCATTGTTGAAGATAAATTGGGAAAATGGAGTTTCAAGAGTAAAACATATGACACTTTATATGATGGATACATGTTCCCTCTACTTGTTCAAGAACAAATGGAGTTTTGGCCTGAACAAAATCTTCGTCAAAGAACATGGATGAGCATAAGTGAGGCAAGAGAGGTTTGTCAACACTGGTGGATGAAAGAGGCTTTGGACAGATTAGTAAACCGTCTTTTGGGTCAAAAACTTGTTCGTGAAAACCTTCGTCCTATAAATTGCATTGGGGATGCCAAATCTGACTTGTTAATAGTGTAA 582 0.3866 MVALVSQENVVTLVSRTGRELQRYRKGRRQVVGCIPYRFKIGEKKSLDVLDELEVLVISSQKGKGMLFPKGGWELDESQKEAAMRETMEEAGVKGIVEDKLGKWSFKSKTYDTLYDGYMFPLLVQEQMEFWPEQNLRQRTWMSISEAREVCQHWWMKEALDRLVNRLLGQKLVRENLRPINCIGDAKSDLLIV 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04112 193 FunFam Nudix hydrolase 17, mitochondrial 14 166 - -
Vivi3g04112 193 ProSitePatterns Nudix box signature. 71 92 IPR020084 GO:0016787
Vivi3g04112 193 SUPERFAMILY Nudix 19 166 IPR015797 -
Vivi3g04112 193 ProSiteProfiles Nudix hydrolase domain profile. 27 164 IPR000086 -
Vivi3g04112 193 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 14 167 - -
Vivi3g04112 193 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 14 166 - -
Vivi3g04112 193 CDD Nudix_Hydrolase_9 30 157 IPR047198 GO:0016462
Vivi3g04112 193 Pfam NUDIX domain 51 161 IPR000086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04112 Vivi-Chr3 72087173 72088686 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04112 K07766 - tpra:123917076 354.755