Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04111 ATGATTGTGTTGTCTTTGCCTGCTTCCAGTGCAACCTCTCAAGTTATTATTGATTGTACCTTGGATGTGAGTGAATCTGTTCGCAAAGCAGCATACTGTGTTCTAGCTAATAAATTTCCTCTTCAAACTTTAAGCATTAAGCACAGGACAATCATTCTTCGGAGAGGACTTGCTGACCGATCTGTTGGTGTCTCGAAGGAATGTTTCAAACTATTGAAAGACGAATGGCTTATAAAATGCTGTAATGGTGATCCTTTACAACTTTTGAAGTATCTCGATGTTGAAACATATGAATCAGTGAGCGAGTCTGTCATGGAAGCTCTTCTAAAAGCTGGTTTAGTAAAACTAAAGAATGGTGCAAGTATCCAGCAGTATATATCATCAAATGGTGACACAGCAGAAGGGGAAGCGGTTCGTTGTCCTCCAAGCATTGCATTGATGGAAGCAGAGGCTGCTCTTTATTGGAGAATTGTTTGCAAGCATTTGCAGTCAGAAGCACATACCTTAGGCTCTGATGCTGCAGCCACAGCGGGTACCGAAGCAGAAGTATATGCTGCCGAAGCATCAGATAAAAATGATCTTCTAGAAAAAATTCTTCCCGCTACAGTTGATGATTACATAGAGTTGGTCAGAGCTAATATCGTTGCTGGATCGAACCATCGCTTTACATGCCGGCAGCTGCTTTTGCTTGGTGCTATGTTTGACTTTTCTGACACTTCGTCTAGAAAAGCTGCTAGTTCGTTTCTGCAGGAACTGATGAGCAAGCCTCCTGAGCATGAGGTTGATAATGAAGGGAATATTGTATTCATTGGAGATGGCTTAAGTTTTGGTGGAGATACTCATTGGGCAGAAGCCATAGCCAAATTGGCAAGGAAAGTCCATGCTGCTCCTGGTGAATTTGAAGAAGTTGTTCTTGCAATCATAGAAAAGCTAGCTCAACCTTGCAGAGAGAGAACAGCAGATTATGTGCAGTGGATACACACCCTTTCCCTTATTGGTCTTTTACTGAAAAATGCCGTGTCCATGCGCTTTCTTCATGGCAAGTCTATAGAACCAGATGAACTACTCCAATCTTTACTTCTTCCCGGGGCAAAACAATCTCTCGCAGACGTGCAAAGGATTGCTGTAAGATGTCTTGGCCTCTTTGGGCTGTTGGAGAGGAAACCAAATGCTGAACTTTTGAAACAGCTAAGAGTTTCATACATTAAGGGGCCACATATAATTAGTACAGAGGCTGCTAAAGCATTAATTGATCTTGTTATGTGGCATGGTCCTCAAGAAGTTGACAGGGTTTTAGATCACGAAATTCCAAGCCAATTAAACTGTGACAAAAAATCTTTTTGTCCCGTGAACTTCTCTGATTTCGAAGGGGATTCAAATTCAAACGTTGGCATACTTGATCTTTTATACGGTGGCTTTGAAAATGAAGACTGGGCTAATCCGTTAACTAGCAATGAAGATGAATGCATTTATGCTATACTTGGAGAGGGCTTTGCGAAAATTCTTCTCCTAAGTGACAACTATCCAAGCATACCGGCTTCTTTGCACCCTGTGCTTTTATCTAAACTCATTTACTTGTACTTCAGTGATGTATCAGAAAATATGCACAGGTTGAAGCAATGCTTATCTGTTTTCTTTGAGCACTACCCATGTCTCTCAACAAAACACAAGAGGTGTGTATTGAAGGCTTTCATTCCTGTTATGCGTTCAATGTGGCCAGGAATTTTTGGCAATTCCGGGGGCTCTCCTTTTATGGTGTCTCAGTTACGTAAACGTGCAGTTCAAGCTTCACGTTTTATGTTGCAGATGGTGCAGATTCCATTATTTGTTAAAGAGACTGAAGCAGTCTGTGAAAACACTAGTCCAGAAACTCCAGAAGTTATTGATAGTTATGCTGAAGTTCCATTTGAGTGTGGTGAGGAGGGACTCGCACTACACATAGCCATAGAGGTCACAAGCTTTCACTCAAAGAAGACAGCTGCTGAGAAGGCATATGTATCGGCATTATGTAGAATGCTTGTCTCGCTTCATTTTCGGTTATCAGAACAAGGGCCCATTAAAATTATGAGGAAGCTTTTAAATCGTCTGGCTGAATGTGTATCTTCAGAGAAGGATCTTGTTAAAGAATTAAAGCACATGGCTGAGCATCTAATGACAGTTGACAGGCAACCAGATCAGGAGTTGTTGCAAGATGAAGTTAATCTCATTTTTGGGAAACTAGAACTTGACTTCAACCTGGATTTGGATGCTTCTGTTGCAATGCCACAAACACCAGCTGTACCGCCAACAAGAGCCACACGTACAAGGAGAAGGGTAAGGATTGAGAAAGACAGTTCTGATTCTGACGATGAAGAAGTTTCATTCGCTTCCGTGGTTCCTACCACCATTAATACGGTAGGCCGCTCACAGAGAGCAAGCAAAACTGCAGCCATGAACAAGATGATGTCGTCTACCTGTAGAACACTTGAAATTGATGAAATTGACGAGCTAGAGGAAGAAGAGTCGAATGTGACATCTGAAGATTCTGAAGAATTCGACCAGAGTAGTTAA 2550 0.4176 MIVLSLPASSATSQVIIDCTLDVSESVRKAAYCVLANKFPLQTLSIKHRTIILRRGLADRSVGVSKECFKLLKDEWLIKCCNGDPLQLLKYLDVETYESVSESVMEALLKAGLVKLKNGASIQQYISSNGDTAEGEAVRCPPSIALMEAEAALYWRIVCKHLQSEAHTLGSDAAATAGTEAEVYAAEASDKNDLLEKILPATVDDYIELVRANIVAGSNHRFTCRQLLLLGAMFDFSDTSSRKAASSFLQELMSKPPEHEVDNEGNIVFIGDGLSFGGDTHWAEAIAKLARKVHAAPGEFEEVVLAIIEKLAQPCRERTADYVQWIHTLSLIGLLLKNAVSMRFLHGKSIEPDELLQSLLLPGAKQSLADVQRIAVRCLGLFGLLERKPNAELLKQLRVSYIKGPHIISTEAAKALIDLVMWHGPQEVDRVLDHEIPSQLNCDKKSFCPVNFSDFEGDSNSNVGILDLLYGGFENEDWANPLTSNEDECIYAILGEGFAKILLLSDNYPSIPASLHPVLLSKLIYLYFSDVSENMHRLKQCLSVFFEHYPCLSTKHKRCVLKAFIPVMRSMWPGIFGNSGGSPFMVSQLRKRAVQASRFMLQMVQIPLFVKETEAVCENTSPETPEVIDSYAEVPFECGEEGLALHIAIEVTSFHSKKTAAEKAYVSALCRMLVSLHFRLSEQGPIKIMRKLLNRLAECVSSEKDLVKELKHMAEHLMTVDRQPDQELLQDEVNLIFGKLELDFNLDLDASVAMPQTPAVPPTRATRTRRRVRIEKDSSDSDDEEVSFASVVPTTINTVGRSQRASKTAAMNKMMSSTCRTLEIDEIDELEEEESNVTSEDSEEFDQSS 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04111 849 MobiDBLite consensus disorder prediction 755 786 - -
Vivi3g04111 849 SUPERFAMILY ARM repeat 17 710 IPR016024 -
Vivi3g04111 849 PANTHER CONDENSIN COMPLEX SUBUNIT 3-RELATED 1 842 IPR027165 GO:0000796|GO:0007076
Vivi3g04111 849 MobiDBLite consensus disorder prediction 830 849 - -
Vivi3g04111 849 Pfam Nuclear condensing complex subunits, C-term domain 329 678 IPR025977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04111 Vivi-Chr3 72018440 72025589 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04111 K06678 - gmx:100817677 1281.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g04111 3 72018440 72025589 Vivi3g04111 3 72018440 72025589 ECH