Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04100 ATGGGGTTAGGTTTGTTAGCTTCCAAGGCCATGAGACCGACAGCCTCCAGGCTCCTCAATTTTCAAAACCCTAACAATCTTTTCCTCCGAACAATCGTCTCCAAACCGGAGCTTCGGAAACCCGAACCCGCTGCCGCGCAACCTCAGCCAGAGCCGCCGCTTGTCGATCTATCTCCCCGGACTCCGGTTGGTGGTGCTAGGGTCCATTTCTCTAATCCTGAAGATGCAATCGAGGTGTTTGTGGATGGGTTTCCTGTTAAGATTCCGAAAGGATTTTCTGTTCTTCAGGCGTGTGAGGTTGCCGGTGTTGATATTCCTCGGTTTTGTTATCATAGCAGGCTTTCGATTGCGGGAAATTGCCGGATGTGTCTTGTTGAGGTTGAGAAATCTCCTAAGCCTGTTGCTTCTTGCGCTATGCCTGCTCTTCCTGGGATGAAAATCAAAACTGACACACCTGTGGCCAAGAAAGCTCGAGAAGGGGTGATGGAATTTTTATTGATGAATCATCCATTAGATTGCCCAATTTGTGATCAGGGTGGAGAGTGTGATCTTCAGGATCAGTCAATGGCATTTGGCTCTGATCGTGGTCGGTTCACTGATATGAAGAGATCTGTGGTGGACAAAAATCTTGGGCCATTGGTGAAGACTGTGATGACTCGGTGCATTCAATGTACAAGGTGTGTTAGATTTGCATCAGAGGTTGCAGGAGTTCAGGATCTTGGCATGTTAGGTCGTGGCAGCGGAGAAGAGATTGGAACATATGTTGAAAAACTCATGACAAGTGAACTCTCTGGAAATGTGATAGATATCTGTCCTGTAGGAGCACTCACTTCAAAACCTTTTGCATTTAAAGCCCGGAATTGGGAGTTGAAGGGTACAGAGACCATTGATGTTACTGATGCTGTTGGGTCTAATATTCGAATTGATAGCAGAGGTCCTGAAGTCTTGCGTATTGTTCCTCGTTTAAATGAGGACATAAATGAAGAATGGATTTCAGACAAAACCCGCTTTTGTTATGATGGTTTGAAGAGGCAGAGGTTAAATGACCCTATGATTCGTGGTCCTGATGGTCGCTTTAAGCCTGTGAACTGGGGCGATGCCCTAGCTGTGGTAGCAGAGGCTGTTCATCAAGTTAAACCAGATGAAATTGTTGGAATATCTGGCAAGCTTTCTGATGCCGAATCCATGATTGTTCTAAAAGATTTCTTAAACAGGATGGGGTCAAATAATGTCTGGGGTGAAGGCATTAGCGAAAACACTAATGCTGATTTGAGGTCAGGATATATTATGAATACTAGCATTGCTGGTCTTGAGAAAGCAGATGCTTTCCTATTGGTTGGCACCCAGCCCCGGGTGGAAGCTGCTATGGTTAATGCCAGAATACGCAAGACTGTCACATCAAACCATGCCAAAGTAGGTTACGTTGGGCCTGCTACTGATTTCAACTATGATCACCAGCATCTTGGTACTGGTCCTCAAACTCTTGTTGAAATTGCCGAGGGTCGACACCCATTTTCCAAGACTATTTCAAATGCCAAGCACCCTGTTATCATTGTTGGTGCTGGGATTTTTGAGAGGAAGGATCAGGATGCAATTTTTGCAGCTATTGAGACCATTGCAAAACAAGGGAATGTTGTCAGATCTGATTGGAATGGCCTTAATGTATTACTCCTCCATGCTGCCCAGGCTGCTGCACTTGACCTTGGACTTGTGCCCCAATCTGAAAAAAGCCTTGAATCTGCAAAGTTTGTATATTTGATGGGAGCTGATGATACAAACATAGACAAAATCCCAAAGGACGCATTTGTTGTTTATCAAGGTCACCATGGTGATAAGAGTGTTTATCGTGCTGACGTCATTTTGCCAGCAGCAGCATTCAGTGAGAAGGAAGGTACCTATGAAAATACTGAAGGATGCACACAACAAACGTGGCCTGCAGTTCCAACAGTTGGTGACTCCAGAGATGATTGGAAGATAATTCGAGCTCTGTCAGAGGTAGCAGGGGTGCGTTTACCCTATGATACAATTGGCGGCGTCCGCTCCAGATTGAGGAATGTAGCACCAAACCTTGCGCAAATGGATGAGAGAGAACCAGCCGCATTGCCATCTTCATTAAGACCAACCTTCACTCAGAAGGTGGATCCAACTCCATTTGGGGTTGCAGTTGAGAACTTCTATATGACAGATGCCATTACCAGGGCATCAAAGATAATGGCTCAATGCAGTGCTATGCTGTTGAAGAAATGA 2247 0.4544 MGLGLLASKAMRPTASRLLNFQNPNNLFLRTIVSKPELRKPEPAAAQPQPEPPLVDLSPRTPVGGARVHFSNPEDAIEVFVDGFPVKIPKGFSVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEVEKSPKPVASCAMPALPGMKIKTDTPVAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTDMKRSVVDKNLGPLVKTVMTRCIQCTRCVRFASEVAGVQDLGMLGRGSGEEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKARNWELKGTETIDVTDAVGSNIRIDSRGPEVLRIVPRLNEDINEEWISDKTRFCYDGLKRQRLNDPMIRGPDGRFKPVNWGDALAVVAEAVHQVKPDEIVGISGKLSDAESMIVLKDFLNRMGSNNVWGEGISENTNADLRSGYIMNTSIAGLEKADAFLLVGTQPRVEAAMVNARIRKTVTSNHAKVGYVGPATDFNYDHQHLGTGPQTLVEIAEGRHPFSKTISNAKHPVIIVGAGIFERKDQDAIFAAIETIAKQGNVVRSDWNGLNVLLLHAAQAAALDLGLVPQSEKSLESAKFVYLMGADDTNIDKIPKDAFVVYQGHHGDKSVYRADVILPAAAFSEKEGTYENTEGCTQQTWPAVPTVGDSRDDWKIIRALSEVAGVRLPYDTIGGVRSRLRNVAPNLAQMDEREPAALPSSLRPTFTQKVDPTPFGVAVENFYMTDAITRASKIMAQCSAMLLKK 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04100 748 Gene3D - 76 198 - -
Vivi3g04100 748 ProSitePatterns Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 173 185 IPR000283 GO:0008137|GO:0016020|GO:0042773
Vivi3g04100 748 SMART NADH_G_4Fe_4S_3_2 158 198 IPR019574 GO:0016491
Vivi3g04100 748 NCBIfam NADH-quinone oxidoreductase subunit NuoG 79 663 IPR010228 GO:0016651|GO:0051536
Vivi3g04100 748 FunFam NADH-ubiquinone oxidoreductase 75 kDa subunit 281 396 - -
Vivi3g04100 748 SUPERFAMILY 2Fe-2S ferredoxin-like 77 149 IPR036010 GO:0051536
Vivi3g04100 748 CDD fer2 77 148 IPR001041 GO:0051536
Vivi3g04100 748 Gene3D - 582 699 - -
Vivi3g04100 748 Pfam Molybdopterin oxidoreductase 346 665 IPR006656 GO:0016491
Vivi3g04100 748 Pfam NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 158 195 IPR019574 GO:0016491
Vivi3g04100 748 Gene3D - 281 394 - -
Vivi3g04100 748 MobiDBLite consensus disorder prediction 43 57 - -
Vivi3g04100 748 ProSitePatterns Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 106 123 IPR000283 GO:0008137|GO:0016020|GO:0042773
Vivi3g04100 748 Pfam NADH-ubiquinone oxidoreductase subunit G, C-terminal 710 741 IPR015405 GO:0016651|GO:0051536
Vivi3g04100 748 SUPERFAMILY 4Fe-4S ferredoxins 150 286 - -
Vivi3g04100 748 ProSiteProfiles Prokaryotic molybdopterin oxidoreductases 4Fe-4S domain profile. 290 346 IPR006963 GO:0016491
Vivi3g04100 748 Gene3D - 202 279 - -
Vivi3g04100 748 PANTHER RESPIRATORY NITRATE REDUCTASE 146 743 - -
Vivi3g04100 748 Pfam 2Fe-2S iron-sulfur cluster binding domain 75 152 - -
Vivi3g04100 748 ProSiteProfiles 2Fe-2S ferredoxin-type iron-sulfur binding domain profile. 75 153 IPR001041 GO:0051536
Vivi3g04100 748 FunFam NADH dehydrogenase [ubiquinone] iron-sulfur protein 1 mitochondrial 573 698 - -
Vivi3g04100 748 CDD MopB_Res-Cmplx1_Nad11 294 667 - -
Vivi3g04100 748 FunFam NADH-ubiquinone oxidoreductase 75 kDa subunit 202 279 - -
Vivi3g04100 748 ProSiteProfiles His(Cys)3-ligated-type [4Fe-4S] domain profile. 153 192 IPR019574 GO:0016491
Vivi3g04100 748 ProSitePatterns Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 220 230 IPR000283 GO:0008137|GO:0016020|GO:0042773
Vivi3g04100 748 MobiDBLite consensus disorder prediction 40 66 - -
Vivi3g04100 748 FunFam NADH-quinone oxidoreductase 355 416 - -
Vivi3g04100 748 FunFam NADH-quinone oxidoreductase subunit G 76 198 - -
Vivi3g04100 748 SUPERFAMILY Formate dehydrogenase/DMSO reductase, domains 1-3 288 695 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04100 K03934 - gmx:100802040 1333.16