Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04080 ATGGAAATCAATATTTCAAGGTGTCATCATCTAGAAGCACAAGGGATATTCTTTTCCAATATTTCGAGGACAAAAGGAAGAAAAATTTCTCATAAACTTCTGTGCAATGTAGTATCCCTGAATTCAAGATGGGACTTTCAAATATTAGCCTCTTCGTGCCAAACATTTACTGCAGTGTATCCAAGAAGGCCTTTTTTTTGTAGAACACATTCAATGGCAACTCGTATAGAGGAATCTGAATCATTACAAGGAGATAATCCTAATGAGGATATGGATCCATCTACAGACTCAGAAGACGAGAGATTGTCACAACCACTTACCAATGAACAGATAAAGGTATTGCTTGCTGATACTCAAAGAGCAAACCTCACTAAGAAGCTTAGTGAAGCCAACCAACAAAATCGATTCCTAAAAAGACAGTTGTATATAAAGGAGGATGCATTGGTAACGTTTAAAAGTGAACTTGCTGTCCTAGAGCTTGAAGTTCAGGCTTTGGCCAGGCTAGCAGAAGAAATAGCTAAATCTGGTATTCCAGAAGGTTCGAGGAAGATCAATGGAAAGTACATTCATACTCACCTTGTTGGTAGATTAAAAGCTGTACACGAGCAATTAAACGAGCAAATAAAGGATGTTGATGCGGCACAATCAAAGGAGGTCTCTGTGTTTTGGGCCGGCATGGCTGAGAGTGTGCAAATTATGGGCAGCTTTGATGGTTGGAGCCAAGGAGAGCACCTTTCACCAGAGTATACAGGTTCCTACACAAGGTTCTCAACAACATTGATGCTCAGGCCTGGAAGGTATGAAGTCAAATTCTTAGTAGATGGTGAATGGCACCTATCATCAGAGTTACCTGTAACTGGTGAAGGGTTAATGAAAAATAATTTGTTAATTGTTGAGTGA 900 0.3967 MEINISRCHHLEAQGIFFSNISRTKGRKISHKLLCNVVSLNSRWDFQILASSCQTFTAVYPRRPFFCRTHSMATRIEESESLQGDNPNEDMDPSTDSEDERLSQPLTNEQIKVLLADTQRANLTKKLSEANQQNRFLKRQLYIKEDALVTFKSELAVLELEVQALARLAEEIAKSGIPEGSRKINGKYIHTHLVGRLKAVHEQLNEQIKDVDAAQSKEVSVFWAGMAESVQIMGSFDGWSQGEHLSPEYTGSYTRFSTTLMLRPGRYEVKFLVDGEWHLSSELPVTGEGLMKNNLLIVE 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04080 299 Gene3D Immunoglobulins 209 298 IPR013783 -
Vivi3g04080 299 MobiDBLite consensus disorder prediction 77 103 - -
Vivi3g04080 299 PANTHER PROTEIN PTST, CHLOROPLASTIC 9 299 - -
Vivi3g04080 299 SUPERFAMILY E set domains 219 298 IPR014756 -
Vivi3g04080 299 Coils Coil 120 140 - -
Vivi3g04080 299 CDD E_set_AMPKbeta_like_N 221 298 - -
Vivi3g04080 299 Coils Coil 197 217 - -
Vivi3g04080 299 Pfam Glycogen recognition site of AMP-activated protein kinase 220 288 IPR032640 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04080 Vivi-Chr3 71115602 71123227 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04080 - - gmx:100806282 434.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g04080 3 71115602 71123227 Vivi3g04080 3 71115602 71123227 ECH