Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04025 ATGGAGTTGTACTCTTACAACTTTGTTTCCACAGTGGACATGATTTCTGCTATTGAATTTGACAAGTCTGGTGATCATCTTGCTACCGGTGATCGCGGTGGTCGAGTAGTTCTCTTTGAACGGACAGATTCAAAAGATCAGCATGGATCAAGAAAGGATTTGGAAAGTATCGACTATTCTAATAGTCGACATCCTGAGTTCAGATATAAAACCGAGTTTCAGAGTCACGAACCTGAGTTTGACTATCTTAAGAGCTTGGAAATCGAAGAGAAAATTAACAAAATCAAATGGTGCCAAACAGCTAATGGTTATGTATTCCTCCTATCTACAAATGACAAAACAATCAAATTTTGGAAGGTATGA 363 0.3802 MELYSYNFVSTVDMISAIEFDKSGDHLATGDRGGRVVLFERTDSKDQHGSRKDLESIDYSNSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIKWCQTANGYVFLLSTNDKTIKFWKV 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04025 120 Gene3D - 11 120 IPR015943 GO:0005515
Vivi3g04025 120 ProSitePatterns Protein phosphatase 2A regulatory subunit PR55 signature 1. 79 93 IPR018067 -
Vivi3g04025 120 FunFam Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B 10 120 - -
Vivi3g04025 120 SUPERFAMILY WD40 repeat-like 12 119 IPR036322 GO:0005515
Vivi3g04025 120 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 66 94 IPR000009 GO:0000159|GO:0019888
Vivi3g04025 120 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 19 39 IPR000009 GO:0000159|GO:0019888
Vivi3g04025 120 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 95 120 IPR000009 GO:0000159|GO:0019888
Vivi3g04025 120 PANTHER PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT B 10 120 IPR000009 GO:0000159|GO:0019888
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04025 Vivi-Chr3 69902441 69903718 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04025 K04354 - vvo:131661811 249.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g04025 3 69902441 69903718 Vivi3g04025 3 69902441 69903718 ECH