Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04024 ATGGCTACGAGTGAAAGCGGCGACGGGAGCCACAACCCTGCTTTTGACCCGGATTTGGATACTCCGGCCAATCCGGATCACGAGTTTGCTGAGTTTGGTGCCGGTTGTTTCTGGGGCGTGGAGCTGGCTTTTCAGCGAGTTGCGGGAGTTGTGAAGACTGAAGTTGGATATTCACAGGGTCATACAACGGATCCGACCTACAAATTGGTCTGTACCGGAAGTACTAACCATGTTGAAGTGGTAAGGGTTCAATTTGACCCGAAAGTGCGTCCTTATACTGATCTTTTGGATCTCTTCTGGTCACGACATGATCCCACTACCCTCAATCGCCAGAGAGGTGATGTAGGTGTACAATATAGATCAGGAATCTACTACTACAATGAAACCCAGGCTCGTTTAGCTCAAGAATCAAAAGAAGCTGAACAGTTGAAGCAGAAGAACAAAATTGTAACTGAAATACTTCCAGCAAAGAGGTTTTATAGAGCTGAGGAATATCATCAACAATATTTGGAGAAGGGTGGAGGCCAAGGCAACAGTCAGTCTGCTGAAAAGGGTTGCACTGATCCCATAAGGTGCTATGGCTAA 585 0.4667 MATSESGDGSHNPAFDPDLDTPANPDHEFAEFGAGCFWGVELAFQRVAGVVKTEVGYSQGHTTDPTYKLVCTGSTNHVEVVRVQFDPKVRPYTDLLDLFWSRHDPTTLNRQRGDVGVQYRSGIYYYNETQARLAQESKEAEQLKQKNKIVTEILPAKRFYRAEEYHQQYLEKGGGQGNSQSAEKGCTDPIRCYG 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04024 194 Pfam Peptide methionine sulfoxide reductase 31 173 IPR002569 GO:0008113
Vivi3g04024 194 FunFam Peptide methionine sulfoxide reductase 16 194 - -
Vivi3g04024 194 Coils Coil 126 153 - -
Vivi3g04024 194 NCBIfam peptide-methionine (S)-S-oxide reductase MsrA 29 172 IPR002569 GO:0008113
Vivi3g04024 194 Hamap Peptide methionine sulfoxide reductase MsrA [msrA]. 27 184 IPR002569 GO:0008113
Vivi3g04024 194 PANTHER MITOCHONDRIAL PEPTIDE METHIONINE SULFOXIDE REDUCTASE 24 193 - -
Vivi3g04024 194 SUPERFAMILY Peptide methionine sulfoxide reductase 21 175 IPR036509 GO:0008113
Vivi3g04024 194 Gene3D Peptide methionine sulphoxide reductase MsrA 16 194 IPR036509 GO:0008113
Vivi3g04024 194 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04024 Vivi-Chr3 69896411 69897493 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04024 K07304 - gmx:100527085 345.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g04024 3 69896411 69897493 Vivi3g04024 3 69896411 69897493 ECH