Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03998 ATGGCTAGTAGTAATCTTCGCCAGTTACAAGCTGCTCCTAACAAAATGCAGCTCAAGAAGGAGAGACGCATGTTCTCTACTTCTGATGATAGTGCCATGATGAAACAAGTTCAGTCCACTCATGCACCTGATGGCCGCGAAATCGATGTTAAACCTCTTATTCAAATTGTTGATGAAATATTGATTCAGATCATTGCTCGGAGCGTTGAGGGTCATGAACATGTGAAAAAAGAGCAAGAGACATTGGAAACTGCTGTTGCTTTGGCTGAATTTGATATGCTTGATGCACTGGCTTTTATCATTAACAAAATTTCCTGTGAGCTATCATGCAAATGCTCAGGGGGTGGAGATGCACATGCATCAACAATGGTGTTACTGAATTACCTCTCAAGCTATTCCTGGCATGCAAAAGTTGTGTTAGCCTTAGCAGCATTTGCTGTTATTTTTGGAGAGTTTTGGCTTGTTGCTCAATCAAGTGCTTCAAACACACTTGCCAAATCTGTCGCTCTCCTTAAACAACTACCTGACATTGTAGAGAATTCTGTTTCATTGAGACCACAATTCGATGCACTCAATAAGCTTGTGAAGGCTGCACTTGATGTTACTATGTGCATTGTTGAATTCAAGGAGTTACCTTCTGAATATATCTCAGAAGATGTTCCTCCTATGTCTGTTGCAAGTGCTCATATTCCTATTGCTACCTATTGGGTCATTAGAAGTATTGTGGCCTGTGCTTCACAAATTGCAAGTCTCATAGGGATGAGAAATGAGGCCATGTCATCAGCTTCAGAGGCATGGGAATTATCTAGTCTGGCTCACAAAGTCGCTAGTATATACGAGCACCTCAAAAACCAACTTGCTGTTTGCTATCAATATATAGATGAAAAGAGGCATATTGAGGCATTTCACAATCTGATACGTCTTTTCGAGACAGTTCATGTAGACAACATGAAAATCATGAGAGCACTGATTTATGCAAAGGATGATATCCCTCCACTTATCGATGGAACTACAAAACTAAGGGTTAGTCTTGAGGTACTAAGGAGGAAACATGTGCTACTTCTCATATCAGATCTCGATATTTCGCAAGAAGAGATAATGATACTCGATAACTTGTACAAAGATGCAAGATCGAGGGGCGAGACATACTATGAGATGGTATGGATTCCAGTTGTGGACAAAGCAACATGGAATGAAGTGAATAAGCAAAAGTTTGAGTATCTTCAATCATCAATGCCATGGTATAGTGTTCGCGATCCTTTCATTATCGAACCATCGGTGATTAAGTATATCAAAGAAGTGTGGCATTACACAAAGAGAGCTATTCTAGTAGCCCTTGATCCACAAGGTAGATTGTCCTCCCAAAATGCTCTTCATATGATATGGATTTGGGGAAATTTGGCCTTTCCTTTCACGAGCGAGAAAGAAGAATCCTTGTGGAAGCAAGAGATTTGGAGCCTTGAACTTCTTGTTGATGGCATTGATCCTGCAGTTTTAGACTGGATGACAGAAGGAAAAATCATATGTCTATTTGGAGGAGAAGATCTCGAGTGGATAGAAACATTCACAAAAACAGCGATGAACCTAGCGAGAACAAGCAACTTCGATTTAGAGATGGTTTACGTAGGAAAAAGCAATGCAAAAGAGCGAATGCAGAGAATGATAACCACGTTTAACTCAAAAAGATTCAGTTACTTTTTCCCAAACGTGACATCGATTTGGTTCTTCTGGGCAAGACTCGAGAGCATGTTATACTCAAAACTACAACACGGAAAGACAGTTGAGAATGACAAGATCATGAGCGAAGTTATGACAGTACTTAGTTTCGATGGGAGTGATCGAGGGTGGGCGATATTCTGTAGAGGACCATCTGAAATGGCAAGAGCTAAAGGTGATACTGCTTTAACAAGTTTGAGGGATTTTGATAAATGGAAACATAATATTGAACAAGACGGTTGGGTTCCTGCGTTGAATGATTATATTAAGGAAATTCAACAGCCGCATCATTGTAATCGGCTTATTCTTCCTGGAAGCACTGGTGGAATACCGCAGAAAGTTGTTTGCGCGGAATGTGGGCGTCAAATGGAGAAATATTTTATGTATCGTTGCTGTGTGGAGTGA 2121 0.4045 MASSNLRQLQAAPNKMQLKKERRMFSTSDDSAMMKQVQSTHAPDGREIDVKPLIQIVDEILIQIIARSVEGHEHVKKEQETLETAVALAEFDMLDALAFIINKISCELSCKCSGGGDAHASTMVLLNYLSSYSWHAKVVLALAAFAVIFGEFWLVAQSSASNTLAKSVALLKQLPDIVENSVSLRPQFDALNKLVKAALDVTMCIVEFKELPSEYISEDVPPMSVASAHIPIATYWVIRSIVACASQIASLIGMRNEAMSSASEAWELSSLAHKVASIYEHLKNQLAVCYQYIDEKRHIEAFHNLIRLFETVHVDNMKIMRALIYAKDDIPPLIDGTTKLRVSLEVLRRKHVLLLISDLDISQEEIMILDNLYKDARSRGETYYEMVWIPVVDKATWNEVNKQKFEYLQSSMPWYSVRDPFIIEPSVIKYIKEVWHYTKRAILVALDPQGRLSSQNALHMIWIWGNLAFPFTSEKEESLWKQEIWSLELLVDGIDPAVLDWMTEGKIICLFGGEDLEWIETFTKTAMNLARTSNFDLEMVYVGKSNAKERMQRMITTFNSKRFSYFFPNVTSIWFFWARLESMLYSKLQHGKTVENDKIMSEVMTVLSFDGSDRGWAIFCRGPSEMARAKGDTALTSLRDFDKWKHNIEQDGWVPALNDYIKEIQQPHHCNRLILPGSTGGIPQKVVCAECGRQMEKYFMYRCCVE 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03998 706 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 16 705 IPR039299 GO:0010088
Vivi3g03998 706 Pfam Sieve element occlusion N-terminus 28 313 IPR027942 -
Vivi3g03998 706 Pfam Sieve element occlusion C-terminus 475 704 IPR027944 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03998 Vivi-Chr3 69252203 69255660 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03998 - - gmx:100811452 1179.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g03998 3 69252203 69255660 Vivi3g03998 3 69252203 69255660 ECH