Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03993 ATGACGAATACGGTTGTGCCTACGGTAAAGGACGAGTGTCTTATGGTGAAAAGCCACGTGATTTTGACACGTGTCCCGAAAAACATTGTGGTATCTCCGGTTTCCACAGGATCCGCTTTTTTAGGCGCTACTTCCCCAATTCCAAGCTCCCGTCATGTCTTCACTCTCGGCACTCTCCGAGGATATAGGTTATTATCTTTATTCAGAGTCAAAATATGGTGGATGATACCACGTGTAGGAAGATCCGCGAGTGATGTTCCAATGGAAACTCAATTGCTGCTAGTAGAAGCAAGAGAAGAGACTGCTCTTAAACCAGATATTTCTTCTGATTCTCAAGAGCTAGAACAAGAGAATATTTCCTACATTCTCTTCTTGCCTGTGTTGGACGGAGCATTTCGCGCAAGTTTGCAAGGAACTGCATTTAACGAGCTTCAATTCTGCGTTGAAAGTGGAGATGCCTGTGTTCAAACTTCTCAGTCGCTTGAGGCAGTATTTGTAAATTCAGGTGACAATCCATTTGAGCTAATCAAGGATTCTATCAAGATATTAGAGAAACACAAAGGAACTTTCTGTCATCTTGAAAACAAGGAGATTCCTGTACATCTTGATTGGTTTGGTTGGTGCACTTGGGATGCATTTTACACTCAAGTAAATCCACAAGGAATAAAAGACGGGATTCAAAGTCTCTCAAGTGGAGGTTTTACGCCAAAGTTTGTCATTGTTGATGATGGATGGCAAGAGGCGCTCAACGAGTTTCACAAAGAAGGCGAACCAATAATTGAAGGAACTCAGTTTGCAACAAGACTGATAGACATGAAGGAAAATAGAAAGTTCAGCAGTGCTGGTTCCAACAATTCTTGCAACAATCTCCATGATTTTGTTCATTCTATCAAAGATAACATGGATGTAAAATACGTTTACATGTGGCATGCTTTAGCTGGTTATTGGGGAGGACTACTCCCGTCTTCAGATGCGATGAAAAAGTATAATCCGAAGCTTGTATATCCAATTCAGTCACCTAGTAACACAGGGAACCTAAGAGATATAGCCATGGACAGCTTGGAAAAATATGGAGTTGGAATCATAGATCCATCAAAATTATATGATTTTTACAATGACTATCACAGTTATCTTGCTAGCTGTGGTGTCGATGGAGTCAAAGTAGATGTCCAAAATTTAATAGAAGCCTTGGGTTCAGGTTATGGTGGACGTGTTTCATTAACCAAACAGTATCAAGAAGCTTTAGAGACATCAATTGCAAGGAACTTTAAACGCAATAACCTCATTTGCTGCATGTGTCACAACTCCGATTCAATTTACAGTTCAAAGAAGAGTGCAATAGCGAGAGCATCCGAGGATTTCATGCCAAGGGAACCAACTTTTCAAACCTTACACATTGCTTCAGTAGCTTTTAACAGTCTTCTTCTAGGGGAAATATTTGTGCCAGACTGGGATATGTTCCATAGCAAGCACGAGACAGCTGAGTTTCATGCTGCAGCAAGAGCAATAGGTGGTTGTGCAGTATATGTTAGTGATAAGCCGGGAAATCATGATTTTAAAATCCTGAAGAAACTAGTACTGCCTAATGGATCAGTCTTGAGAGCAAGATATGCAGGTCGTCCTACTCGAGATTGTTTGTTTCAAGATCCTGTAATGGATGGTAAAAGTCTGCTGAAAATATGGAACTTAAACAAGCTGACCGGGGTGATAGGCGTCTTTAATTGCCAAGGAGCAGGAAGTTGGCCAATGAAATCATCAGAAGTCACACCGACACACTTAACCATTTCAGAGAAAATTAGACCACTTGATGTTGAGTTTCTTGAAGACATCGCAGGTGAAAAATGGAATGGAGACTGCATATTATATGCCTTCAATGCAGGCTTGCTTTCCAAGCTACCAAGTAGAGGAAAACTAGAAGTGTCCTTGGAAACTCTTCAATGTGAAGTATATACAGTTTCTCCAATCCGGGTGTTTGGTCATGATGTGCAATTTGCACCAATTGGATTGCTTGACATGTACAATTCAGGAGGAGCCGTAGAAGAACTGTCTTGTACAATAGATGTTGCAGATTGCATAGAAGTAAAAATCAAAAGCAAAGGAGGTGCCCGTTTTGGAGCATACTCGAACGTTAGACCGAAACATTGCTTGGTGGACATGAAAGAGGAGGAGTTTTGTTACAACTCTGAAGATGGGTTAGTGACAATTAAACTTGGTGGTGAAGGCAATTCAAAGGACATAGAACTTGTATTCTAA 2253 0.4083 MTNTVVPTVKDECLMVKSHVILTRVPKNIVVSPVSTGSAFLGATSPIPSSRHVFTLGTLRGYRLLSLFRVKIWWMIPRVGRSASDVPMETQLLLVEAREETALKPDISSDSQELEQENISYILFLPVLDGAFRASLQGTAFNELQFCVESGDACVQTSQSLEAVFVNSGDNPFELIKDSIKILEKHKGTFCHLENKEIPVHLDWFGWCTWDAFYTQVNPQGIKDGIQSLSSGGFTPKFVIVDDGWQEALNEFHKEGEPIIEGTQFATRLIDMKENRKFSSAGSNNSCNNLHDFVHSIKDNMDVKYVYMWHALAGYWGGLLPSSDAMKKYNPKLVYPIQSPSNTGNLRDIAMDSLEKYGVGIIDPSKLYDFYNDYHSYLASCGVDGVKVDVQNLIEALGSGYGGRVSLTKQYQEALETSIARNFKRNNLICCMCHNSDSIYSSKKSAIARASEDFMPREPTFQTLHIASVAFNSLLLGEIFVPDWDMFHSKHETAEFHAAARAIGGCAVYVSDKPGNHDFKILKKLVLPNGSVLRARYAGRPTRDCLFQDPVMDGKSLLKIWNLNKLTGVIGVFNCQGAGSWPMKSSEVTPTHLTISEKIRPLDVEFLEDIAGEKWNGDCILYAFNAGLLSKLPSRGKLEVSLETLQCEVYTVSPIRVFGHDVQFAPIGLLDMYNSGGAVEELSCTIDVADCIEVKIKSKGGARFGAYSNVRPKHCLVDMKEEEFCYNSEDGLVTIKLGGEGNSKDIELVF 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03993 750 PANTHER - 9 744 IPR008811 -
Vivi3g03993 750 Gene3D Aldolase class I 203 527 IPR013785 -
Vivi3g03993 750 Pfam Raffinose synthase or seed imbibition protein Sip1 9 736 IPR008811 -
Vivi3g03993 750 SUPERFAMILY (Trans)glycosidases 201 534 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03993 Vivi-Chr3 69215536 69220208 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g03993 1 738 Glycoside Hydrolase AT1G55740 48.005 0.0 689
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03993 - - psat:127083742 1288.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g03993 3 69215536 69220208 Vivi3g03993 3 69215536 69220208 ECH