Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03992 ATGTTTCTGTCTAACACCAAAATCATGTTCATTATTGTCTTATTCTTCTTGGTTTGTGTTGGATTATGCAATGGTGCAAATCATGAAACACCATTGCAAGGTAGAAAAGGACAGTGGCAACTGCTTCTCAACAACACAGGCGTTGTTGGTATGCACATGGCATTAACCTACAAAAACACTGTCATAATGTTTGATCAAACTGGAGGAGGCCAATCTAGATACAAACTTCAAAAACGATTCAACGGAACAACATGTAGAAAAAACAACAACAATGATTTAACCGATTCAACATGCTATGCTCATTCAGTTGAGTATGATATCAATGCCAATAGAATAAGACCTTTGAGGCTTGACACTGATCCTTGGTGTTCCTCAGGTTCTTTCCTAAGCAATGGAACACTTCTACAAACAGGAGGCTATCATCAAGGTGCTAAGAGGGTTAGATTCTATAGACCTTGTGGGAATAATCAACATTGTGATTGGATACAATCAAAGAAAACTCTATCTGATGAAAGGTGGTATGCTTCTAGTCAGATTCTACCAGAACATGACAGGGTTGTTCTTGTTGGTGGAAGAAGAGTTTTCACTTACGAATTTGTCCCGAAAAGTAGTCCTAATGAAAAATCTTTCGAACTTCCGTTTCTGCATCAAACCAATGACAGAAACTCTGATGGCAACAATTTATATCCCTTCACCCACCTTTCATCCGACGGACACTTGTTCGTTTTCGCCAACCGTGATTCCATTTTACTCAACTTGAGACGTAATAAAGTAATCAAGACGTTTCCTCGGATTCCAGGAAGCGGGTCGAGAAACTACCCGAGTTCGGGATCATCCGTGTTACTCCCATTAGACCATAAAGACAGGTTCCAGAAAGCTGAAGTGATGGTATGTGGAGGTTCATCCACAGGAGCACTCAGTGCTGCTAAAAGCAAAAGGTTCATTTCAGGTTTAAGATCATGTGGGAGAATGGTGATCACAGGAAACAAACACACATGGGAAATGGAGTACATGCCGAATCCGCGTCTCTTACACGACATGTTGATTCTACCTACAGGTAACATCTTGATTATAAACGGTGCTAAACATGGTTGTGCAGGATATGACAATGCTAGAAACGCTTCGCTCGAGCCTTATCTTTATACTCCAAAGAAAAAGCTAGGAAAAAGATTCACCATCCTTCAGAAAACAATGATAGCAAGAATGTATCATTCATCAGCAACTCTTCTACCTGATGGAAGAGTGTTAGTTGCTGGTGGTAACCCGCATGGCAGATACACTTTTCAGAATGTAGCATACCCAACAGAACTTAGACTTCAAGCATTTGTTCCACATTACATGGAGAAGAGGTATCATACTTGGAGGCCAAGTAACCTGACCATAGAGAATCATGCAGTTGGGTATGGTAAAGAGTTTAATGTAAGTTTTGTGTTGAGGAGGAGGCCAAGTGATGAGGTGAGGTTCAGTGTTTATTCGCCGCCGTTTACTACTCACGCGTTCGCGATGAATCAAAGGATGTTGAATCTGAGGTGCAGGAGAATGGTGAGAAGTAGAGAGGGGAGGGTGAGGGCAGTGTTAGAAGCTCCACCGTCATCTATTGTTGCACCTTCTGGTTATTACTTGCTCACGGTTGTGAATGAAGGAATTCCAAGCATTTCACAGTGGATTCAGTTTGTTCATGCTTAG 1686 0.4152 MFLSNTKIMFIIVLFFLVCVGLCNGANHETPLQGRKGQWQLLLNNTGVVGMHMALTYKNTVIMFDQTGGGQSRYKLQKRFNGTTCRKNNNNDLTDSTCYAHSVEYDINANRIRPLRLDTDPWCSSGSFLSNGTLLQTGGYHQGAKRVRFYRPCGNNQHCDWIQSKKTLSDERWYASSQILPEHDRVVLVGGRRVFTYEFVPKSSPNEKSFELPFLHQTNDRNSDGNNLYPFTHLSSDGHLFVFANRDSILLNLRRNKVIKTFPRIPGSGSRNYPSSGSSVLLPLDHKDRFQKAEVMVCGGSSTGALSAAKSKRFISGLRSCGRMVITGNKHTWEMEYMPNPRLLHDMLILPTGNILIINGAKHGCAGYDNARNASLEPYLYTPKKKLGKRFTILQKTMIARMYHSSATLLPDGRVLVAGGNPHGRYTFQNVAYPTELRLQAFVPHYMEKRYHTWRPSNLTIENHAVGYGKEFNVSFVLRRRPSDEVRFSVYSPPFTTHAFAMNQRMLNLRCRRMVRSREGRVRAVLEAPPSSIVAPSGYYLLTVVNEGIPSISQWIQFVHA 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03992 561 Pfam Galactose oxidase-like, Early set domain 455 557 IPR015202 -
Vivi3g03992 561 CDD E_set_GO_C 455 557 IPR015202 -
Vivi3g03992 561 SUPERFAMILY E set domains 451 557 IPR014756 -
Vivi3g03992 561 SUPERFAMILY Galactose oxidase, central domain 103 447 IPR011043 -
Vivi3g03992 561 PANTHER SECRETED PROTEIN-RELATED 17 558 - -
Vivi3g03992 561 Pfam Glyoxal oxidase N-terminus 51 300 IPR009880 -
Vivi3g03992 561 Gene3D - 33 452 IPR037293 -
Vivi3g03992 561 Gene3D Immunoglobulins 454 561 IPR013783 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03992 Vivi-Chr3 69212445 69214130 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03992 - - gmx:100814200 903.279
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g03992 3 69212445 69214130 Vivi3g03992 3 69212445 69214130 ECH