Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03980 ATGGCGTCGAGAACCGGCCACACAAAGCTCTCCTTCGAGGTTCTCCGCCGCAATCCAATCGTAGAAGAAGATTCTTTCCTCCATCGTACCAAATCGGATCCAACAACTCTCCCCGATCGCAAGAAACGTAAGCACCGAGCATCCAAGAAGAAGAAGAAACTTCTCGATCCCGTTGATTCCGTCGCTGATTCCGGCGATCCGAACCGGGAGAATGAATTGCCGATTGTAAACGGACGAGCGTGTAACGGTTTCGGGATTGACGCAATGAGGTATTGTGGTAATGGAGGAAGCGTTGTGTATGAGGAAGCTAGTGAAACGAGTGTCTGTGCTGTTACTGCGGCGCCGGAGGTTGGTTCTTCGTTTCCGAAGACCGTGCGTGGGAGTATGGATGGGTTTAATTTCGGTGAATTGAGGCAAAGGAATGTGAATAGCAGTTCTGAGGATTTAGTTGCCTCTGTGATGGGCGATGACGGTGAAATTGGGAAGGGCGATGATAGTGTGAAGGCGAGTACGGTCGAGGTCGAGACACCGAGAAAAGAACCTGAAAGGAGTGTCCTTACGAAATCGGAAACCGTAGAATCGGTTGACTGGAAGCGGATAATGGAAGAAGATCCGAATTATGTGTTCACAGTAGATAGGTCTCCTGTAGCATACTTCTTGGAGGAAATGTACAATGGGAATTCTTTACGAAGCACAACTACTCTCGGCAATGAAACAGAAAGAGAGAGAGTTTATGACACTATCTTCCGCTTGCCATGGAGATGCGAATTGCTTATAGATGTTGGCTTCTTTGTCTGCTTCGATTCATTTCTTTCGTTATTAACTATTATGCCAACAAGGATCTTGATGACCATTTGGAGGCTTCTAAAGACAAGACAGTTCAAGAGGCTCTCAACAATGGAATTGTCAGATTTCGGATGTTTTATTATTATGAGCTGTGGAGTTGTTCTTTTGCAGAGAACAGACATCAGCTTAATATATCATATGATCCGTGGTCAAGGAACAATAAAATTGTATGTGGTCTACAATGTTTTAGAGATATTTGATAAACTGTGTCAAAGTTTTAATGGGGATGTGTTGCAAACATCATTTCATTCTGCTGAAGGACTTGCAAGTTGCCCCCCAGAAAATATGAGATTCTGGCTTTGGAGATTTGTTTGTGACCAAGCTTTAGCTGTGGTAGCTTCAATTGTTCATTCTTTTATCTTATTAGCTCAGGCAATCACTCTATCTACCTGTATAGTTGCTCACAATAATGCGTTGTTAGCTTTGCTGGTGTCAAATAATTTTGCTGAGATTAAAGGAAATGTATTTAAGCGGTACAGCAGAGATAATGTTCACAGTTTGGTTTACTTTGTTCTGAAACTGCACAATCATCTACACTGCAAGATGGATCTTCCACGAAGAACATCTTCAAAACCTTTGCTCGACACATTAGTATCAAGCTTGTTGACTCGATTTTTCTTCCCTGGAAGTAGCAAGTTGAAGGAATAA 1494 0.429 MASRTGHTKLSFEVLRRNPIVEEDSFLHRTKSDPTTLPDRKKRKHRASKKKKKLLDPVDSVADSGDPNRENELPIVNGRACNGFGIDAMRYCGNGGSVVYEEASETSVCAVTAAPEVGSSFPKTVRGSMDGFNFGELRQRNVNSSSEDLVASVMGDDGEIGKGDDSVKASTVEVETPRKEPERSVLTKSETVESVDWKRIMEEDPNYVFTVDRSPVAYFLEEMYNGNSLRSTTTLGNETERERVYDTIFRLPWRCELLIDVGFFVCFDSFLSLLTIMPTRILMTIWRLLKTRQFKRLSTMELSDFGCFIIMSCGVVLLQRTDISLIYHMIRGQGTIKLYVVYNVLEIFDKLCQSFNGDVLQTSFHSAEGLASCPPENMRFWLWRFVCDQALAVVASIVHSFILLAQAITLSTCIVAHNNALLALLVSNNFAEIKGNVFKRYSRDNVHSLVYFVLKLHNHLHCKMDLPRRTSSKPLLDTLVSSLLTRFFFPGSSKLKE 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03980 497 MobiDBLite consensus disorder prediction 23 70 - -
Vivi3g03980 497 Pfam Eukaryotic membrane protein family 298 450 IPR008010 -
Vivi3g03980 497 MobiDBLite consensus disorder prediction 52 66 - -
Vivi3g03980 497 PANTHER UNCHARACTERIZED 122 452 IPR008010 -
Vivi3g03980 497 MobiDBLite consensus disorder prediction 23 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03980 Vivi-Chr3 68997229 69003584 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03980 - - gmx:100807550 590.882