Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03961 ATGTTGAAGAAACTATATGTATGTGTATTGGAAGCCCGAGACTTACCCGTGAAGAATTCTCGTGTGAAGCTTAAACTTGGAAAGTTCAAGTACAAGACAAGGATATTGAGAAACACGTTCAGCCCCATTTGGAACGAGGAGTTTGTTTTCAAGGTGAAGGATGTTGCACATGAAGTGCTTGATGTAATTCTTGTTAACCATAATGATGAATCTGTAGTGGATTTTGTGGGTGAGGTGCGGATTCCGGTTGGTTCGGTTGTTTTTGAAGAGGATAATAAGCAAATATTGCCGCCGACGTGGTTCTCCCTTCAATGTGTTAACAAGAGTGGCAAATATTTCAACAAATTTTGTGGGAAGATTCTTCTTACAATATCTCTTCATTGCAAGGACCATGCTTCTTTTATAAATCATAAGCATTCTCCAAACTCGACTACTGCATCCGAGGACTCGACAGATTTGAAAGGTCTTCACATTTCCTCTCAACCATCGTTTTGCAAAATTCGTAAAATGGGTGAAGGCAAACATTTGTTCAAGGTTATTGCTAGGATTTTCAATAAAAAGGAACGAAATTCAAAATCCACGGATTGTTCAGAATCATCAAATTCACTATCTGATAATGAAGATAGTGTACAGGAAAATTCACCTCCATGTAGCTTCGAAGAAGGCATTGCAATAATGGAATCAAAAGAAAACCAGCCAGAAAGTCCTGAAAATTTGCAAGGTGGCATTCTAGTAGATAAGATTTTTGCAGTGTCTCCATACAACCTTAATGTATTTCTTTTTGCACCAAATTCACAGTTTAGGAAAGATTTAGCAGAACTACAAGGGACAATAAATTTACAAGAGGGAGCTTGGTCCTGGAAAGGTGAAAATATCTCTTGTTTGACTCGAGTTGTTACTTATACAAAAGCTGCTTCAAAATTAGTTAAGGCTGTCAATGCCACTGAGGATCAAACCTATATTAGAGTAACTAAAGATGAATTTAATGTACTTGTTAGTGTATGCACTCCTGAGGTTCCATATGGGAATACATTTCGGGTCGAATTGCTTTACAAGATAATGCCTGGAGATGTGTCTTCTGGAGAGGAATCTTCTCATCTTGTAATATCATGGGGAATTATCTTCCTTCAAAGCACAATGATGAAAGGTGTGATAGAGAGTGGGGCTAAACAAGGTTTGAATGAGAGTTTTGACCAGTTTTCCAACCTACTTGCTCAGAGTTTCAAGGTGCTTGATAAGGAAAATTTAACTAGCAAAGAACAATTCTTAGCAACTTTGCAGACAGAAAGCCAGTGGAATTGGTGGCAGGCAATTGCATATTTCTGGAATTTCACAATAGTCTCCACACTTTTTATGTTTTTGTATGTGTTGTTGCATATTTTAAGGTGCGGTCCAAGTCAACCTCAGGGCTTGGAATTTAGAGGGATTGAGCTGCCAGATAGCTTAGGAGAGCTGGTTACAAGTGGAATTTTAGTTATCCAGTTGCAGCGTGTTTATAATATGGTATCTCACTTTGTGCAAGCTAGATTTCAAATGGGAACTGACCACGGCATGAAGGCACATGGTGATGGATGGGTTGTTACTGTAGCTTTAATTGAGGGGGTTGACCTGGCTTCATTGGAGTCAACAGGGTTGTCAGATCCCTACGTGGTTTTCACTTGTAATGGACAAACAAGGTCAAGCTCTGTCAAGCTTGAGACATCGAATCCTCAATGGAATGAGCTATTAGAGTTTGATGCTATGGAAGAACCGCCGTCAGTTCTAGGGGTGGAAGTTTTTGATTTTGATGGTCCATTTGACCAGGATGTTTCACTTGGACGTGTCGAAATCAATTTCCTAAAGCACACATCAACAGAATTGGCAGACATGTGGGTCATGCTTGAGGGAAAGCCCACTCTTTCTGTTCAATCGAAGTTGCATTTGAGAATTTTCTTGGATAATAATAAAGGAGTTGAAACTATAAAGGATTACTTGGAGAAGAAGGAAAAGGAAGTAGGCAAGAAGGGTCGACTATTTCTTTCGGCAAGGATTCTGGGATTTTATGCTAATCTATTTGGACATAAAACCAATTTTTTCTTCCTTTGGGAAGATATTGAAAGCATTCAAGTACTTCCTCCATCATTAGCATCATTAGGAAGCCCTACATTGGTCATAATTCTTCGAAGAGGACGAGGTACTGATGCAAGGCATGGTGCCAAGACGCAAGATGAAGAAGGAAGACTTAGGTTTCATTTTCAATCATTTGTCTCATTCGGTTCTGCATCCAGAACAATAACGGCATTGTGGAGAACAAGAATACTCAACCCCTATCAGAAAGAGCAGATTACAGAAGAGCATGAAGATCAAGATGTCTTGTTGATGCCTGAGAACTCTGGATCAATGATAGAAGCTGAGGAAAAAATGTTCAGAATTTACTCAGCAGAACTACCAATTAAGATGAGATCAGTGATAATGGGAATTTTTGATGGAGGACACCTAGAACATAAGATTATGAAGAGAACTGGTTGTATGAACTATGACACTACAGATTGGGAACCAGTAAAACCTGATGTCCTTGAAAGGCATGTTTCTTACCAATTTAACCGGCATCTGTCAGTTTTCGATGTCACAAGCACGCAACAAAAATTACCAAATACAAACACTGATGGGTGGATTGTGAATGAAGTTATGGTCCTTAATGGTGTCCCATTTTCTGATCATTTCCATATTCATTTTAGGTACGAAATTGAGAAATCAGTTATTGGTGAATGTGCTTGCAAATGTGATGTATACATTGGCATTATGTGGCTTAGGAACTCTAAGTTTCAGCAAAGGATCAACAGAAACATAACAGCCAAGTTTAAAACTCAACTGGAGGAAATATTTGAATTGGTGCAGAAAGAGATTTTATTGATGTCTCAGAACTCTTATGAGTAA 2916 0.3879 MLKKLYVCVLEARDLPVKNSRVKLKLGKFKYKTRILRNTFSPIWNEEFVFKVKDVAHEVLDVILVNHNDESVVDFVGEVRIPVGSVVFEEDNKQILPPTWFSLQCVNKSGKYFNKFCGKILLTISLHCKDHASFINHKHSPNSTTASEDSTDLKGLHISSQPSFCKIRKMGEGKHLFKVIARIFNKKERNSKSTDCSESSNSLSDNEDSVQENSPPCSFEEGIAIMESKENQPESPENLQGGILVDKIFAVSPYNLNVFLFAPNSQFRKDLAELQGTINLQEGAWSWKGENISCLTRVVTYTKAASKLVKAVNATEDQTYIRVTKDEFNVLVSVCTPEVPYGNTFRVELLYKIMPGDVSSGEESSHLVISWGIIFLQSTMMKGVIESGAKQGLNESFDQFSNLLAQSFKVLDKENLTSKEQFLATLQTESQWNWWQAIAYFWNFTIVSTLFMFLYVLLHILRCGPSQPQGLEFRGIELPDSLGELVTSGILVIQLQRVYNMVSHFVQARFQMGTDHGMKAHGDGWVVTVALIEGVDLASLESTGLSDPYVVFTCNGQTRSSSVKLETSNPQWNELLEFDAMEEPPSVLGVEVFDFDGPFDQDVSLGRVEINFLKHTSTELADMWVMLEGKPTLSVQSKLHLRIFLDNNKGVETIKDYLEKKEKEVGKKGRLFLSARILGFYANLFGHKTNFFFLWEDIESIQVLPPSLASLGSPTLVIILRRGRGTDARHGAKTQDEEGRLRFHFQSFVSFGSASRTITALWRTRILNPYQKEQITEEHEDQDVLLMPENSGSMIEAEEKMFRIYSAELPIKMRSVIMGIFDGGHLEHKIMKRTGCMNYDTTDWEPVKPDVLERHVSYQFNRHLSVFDVTSTQQKLPNTNTDGWIVNEVMVLNGVPFSDHFHIHFRYEIEKSVIGECACKCDVYIGIMWLRNSKFQQRINRNITAKFKTQLEEIFELVQKEILLMSQNSYE 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03961 971 ProSiteProfiles VASt domain profile. 240 412 IPR031968 -
Vivi3g03961 971 MobiDBLite consensus disorder prediction 191 215 - -
Vivi3g03961 971 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 134 IPR035892 -
Vivi3g03961 971 MobiDBLite consensus disorder prediction 195 215 - -
Vivi3g03961 971 Gene3D - 645 764 IPR011993 -
Vivi3g03961 971 Gene3D C2 domain 510 644 IPR035892 -
Vivi3g03961 971 PANTHER BNAA05G37250D PROTEIN 4 668 IPR044511 -
Vivi3g03961 971 SMART C2_3c 4 95 IPR000008 -
Vivi3g03961 971 SMART C2_3c 526 625 IPR000008 -
Vivi3g03961 971 ProSiteProfiles C2 domain profile. 1 96 IPR000008 -
Vivi3g03961 971 CDD C2 527 627 - -
Vivi3g03961 971 ProSiteProfiles C2 domain profile. 506 625 IPR000008 -
Vivi3g03961 971 Gene3D C2 domain 2 153 IPR035892 -
Vivi3g03961 971 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 525 650 IPR035892 -
Vivi3g03961 971 CDD C2 5 103 - -
Vivi3g03961 971 Pfam VAD1 Analog of StAR-related lipid transfer domain 244 392 IPR031968 -
Vivi3g03961 971 Pfam VAD1 Analog of StAR-related lipid transfer domain 804 943 IPR031968 -
Vivi3g03961 971 ProSiteProfiles VASt domain profile. 800 962 IPR031968 -
Vivi3g03961 971 Pfam C2 domain 4 89 IPR000008 -
Vivi3g03961 971 Pfam C2 domain 526 625 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03961 Vivi-Chr3 68719080 68724584 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g03961 5 140 Lipid Metabolism Gene Families AT1G22610 31.690 3.46e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03961 - - gmx:100811103 1455.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g03961 3 68719080 68724584 Vivi3g03961 3 68719080 68724584 ECH