Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03943 ATGGCCAAGATTCCCAATACAGTATTACTCTCTTCCAAGCACTTGTTAGTGTTATCACTCGCTTTAAATGTCAGCTTCATACTGCGAATGCTCTATGAAGGTGAACAAGGACACAACAACATCTCTTGTTACAAAAATGGAACAGATTTTGACACAAAAACACATAGCAATATCCTCAAATCACGTGTTGTTATGTCATCATCCACTTCGTCTTTGGCAAATTCTACATGCATAGACGTTAAAGCACGCAGCAACAGAATTATCAACCTCGATCATGGCAATCCGACAGTGTATGAGAGATATTGGAGACAAAGTGGTGACAAGACAAGTATAACAATCAAAGGATGGCAATCCATGAGCTATTTTGTGGATGTGTCCAACATATGCTGGTTTCTTGAGGCAGAGTTTGCAAAGGAGGTAATGAGGTTGCACAGAGTGGTCGGGAATGCAGTAACTGAAGGACGTTACATTGTTGTAGGGACAGGTTCCTCTCAACTGTTTCTTGCTGCACTATATGCTCTCTCTCATTCTCAAGCAACTCAACCAATCGACGTTGTCTGTGCCGCACCCTACTACTCTTCATACCTAACAATGACGGATTTTCTAAAATCCGGGCTATACAAATGGGGAGGTGATGCAAATAGTTACGAGAAAGATGGTCCCTACATTGAACTGATAACTTCACCGAATAATCCTGATGGACATGCGAGGACCTCTAAGGTTAACCGTAGTCAGGGACTTCTGGTTCACGACCTTGCATATTACTGGCCGCAATACACTCCTATATCATTTCCTGCAGATAATGATCTAACCCTTTTTACTCTCTCAAAAATCACCGGTCATGCAGGATCGCGCATAGGGTGGGCACTTGTGAAAGACAAAGAAGTAGCAAAGAAAATGACCAAGTTCATAGAGTTAAACTCAATAGGAGTCTCAAAGGATTCACAGCTCCGGGCTGCTAAGATTTTAAGCGCGGTTTCTGATAGTTGCAAACAAGAAAACTCTCTAGAGGGTGACTCATTCTTCGAGTTCAGCCATAAGGTCATGACAAAGAGGTGGAAGCTGCTGAGAGAAGTAGTAGACCGTGGTGAATTGTTCAGTTTGCCTCAATTTTCTCCTGCTTTCTGTAACTTTTTCAATCAGGTGTTGGAACCTCAACCAGCTTTTGTGTGGTTGAAATGTGAGGGAAATGTGGAAGACTGTGAAAGCTTCCTTAGAGAACACAAGATCTTAACCAGAAGTGGAAGACAGTTTGGGGTTAGCCCAAAATATGTAAGAATTAGCTTGTTGGATACTGATGAAAATTTTAGCCAATTTCTAGATAGATTATCTAGCATATAG 1341 0.4169 MAKIPNTVLLSSKHLLVLSLALNVSFILRMLYEGEQGHNNISCYKNGTDFDTKTHSNILKSRVVMSSSTSSLANSTCIDVKARSNRIINLDHGNPTVYERYWRQSGDKTSITIKGWQSMSYFVDVSNICWFLEAEFAKEVMRLHRVVGNAVTEGRYIVVGTGSSQLFLAALYALSHSQATQPIDVVCAAPYYSSYLTMTDFLKSGLYKWGGDANSYEKDGPYIELITSPNNPDGHARTSKVNRSQGLLVHDLAYYWPQYTPISFPADNDLTLFTLSKITGHAGSRIGWALVKDKEVAKKMTKFIELNSIGVSKDSQLRAAKILSAVSDSCKQENSLEGDSFFEFSHKVMTKRWKLLREVVDRGELFSLPQFSPAFCNFFNQVLEPQPAFVWLKCEGNVEDCESFLREHKILTRSGRQFGVSPKYVRISLLDTDENFSQFLDRLSSI 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03943 446 CDD AAT_like 135 443 - -
Vivi3g03943 446 SUPERFAMILY PLP-dependent transferases 83 445 IPR015424 -
Vivi3g03943 446 Gene3D Aspartate Aminotransferase, domain 1 339 446 IPR015422 GO:0003824
Vivi3g03943 446 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 83 445 - -
Vivi3g03943 446 Gene3D - 32 128 IPR037029 GO:0016846
Vivi3g03943 446 Pfam Allinase 88 445 IPR006948 GO:0016846
Vivi3g03943 446 Gene3D - 132 336 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03943 Vivi-Chr3 68262580 68268998 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03943 K16903 - gmx:100807013 655.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g03943 3 68262580 68268998 Vivi3g03943 3 68262580 68268998 ECH