Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03942 ATGGCACCACCAAGCATAACCAAAACCGCAACCCCCCAAGAAGTAATAAGCATCATCGATATTGGTAATGGTAACTCACCCTTATTCTCCATAACCTTAGACCAATCACGTAATTTCCTTGCAAATGGCCACCCTTTCCTCACCCAAGTCCCACCTAACATAACAACAACAACAACAACCACTCCTTCCTCTTTTCTCAATCTCAAATCCAACAAAGACACCATCACCAACAACAACATGTTGCAACAAGGTTGTTTTGTTGGGTTCAACACCACCGAACCCAAAAGCCACCATGTAGTTCCACTCGGCAAACTAAAAGGAATCAAATTCATGAGCATATTCCGGTTCAAAGTTTGGTGGACAACTCACTGGGTCGGAACAAACGGACACGAGCTACAACACGAAACACAAATGTTAATCCTCGACCAAAACATCTCCCTCAGACGACCCTATGTCTTACTCCTCCCAATCCTCGAAAACAACTTCCGAACCTGTCTCCAACCCGGTCTCAACGATCACATAGACATGTGTATCGAAAGCGGTTCAACACACGTCACCGGTTCCACCTTCAAAGCCTGTCTTTACATCCATCTCAGCAACGACCCTTACCATTTAGTAAAAGAAGCAGTTAAAGTAATCCAAACCCAGTTAGGAACATTCAAAACTCTCGAAGAGAAAACACCACCTGGAATTATAGACAAATTCGGTTGGTGCACGTGGGATGCTTTTTACTTGAAGGTTCATCCAAGAGGTGTACGGGAAGGTGTAAAGTCTCTCACAGAGGGTGGTTGTCCTCCAGGTTTTGTCATCATCGACGACGGTTGGCAATCGATTTCTCATGATGATGATGTAAATGATGATGATTCAGGAATGAACCGAACCTCAGCTGGGGAACAAATGCCATGCAGACTTATAAAATACGAAGAGAATTATAAATTTAGAGAATACAAAAATCGTGGGAACAATGGTTTGGGTGGTTTTGTGAGGGATTTGAAGGAAGAGTTTAGGAGTGTGGAGAGTGTTTATGTTTGGCATGCGCTTTGTGGGTATTGGGGTGGGGTTAGACCTAAGGTGTTGGGAATGGCGGAAGCTAGGGTTGTGGTACCGAAGTTGTCGCCGGGGGTGAAGATGACAATGGAGGATTTGGCGGTGGATAAGATTATGGAGAATGGTGTGGGGCTGGTGCCGCCAAATTTGGTGCAGCAGATGTTTGATGGACTTCACTCTCATTTGGAGTCGGCGGGGATTGACGGCGTTAAAGTTGACGTTATCCATTTGCTTGAGTTACTATCAGAGGACTATGGCGGACGAGTTGAACTTGCAAGAGCTTATTACAAAGCACTAACCTCATCAGTGAACAAACATTTCAAAGGCAACGGTGTAATTGCCAGCATGGAGCATTGCAATGACTTCTTTCTCCTCGGCACAGAAGCCATATCTCTCGGCCGCGTAGGAGACGATTTTTGGTGCTCTGATCCCTCTGGTGATCCAAATGGTACATACTGGCTTCAAGGCTGTCACATGGTACATTGTGCCTACAACAGTTTATGGATGGGAAATTTCATTCATCCAGATTGGGACATGTTTCAGTCCACTCATCCTTGTGCCGAATTTCACGCCGCATCAAGAGCTATCTCAGGTGGACCGATTTATGTTAGTGACTGTGTTGGTAATCACAATTTCAAGTTGCTCAAATCTCTTGTTTTGCCCGATGGTTCTATCTTGCGTTGTCAACATTTCGCGCTTCCTACACGAGATTGCTTGTTTGAAGACCCTTTGCATAATGGCAAAACAATGCTCAAAATTTGGAATCTCAACAAATATGCGGGTGTTTTGGGTCTATTCAATTGCCAAGGTGGCGGGTGGTGTCCTGAGACACGGCGAAACAAGAGCGCGTTTGAATTTTCACAAGCGGTGACATGTTATGCGAGTCCTGAAGATATTGAATGGTGCAATGGGAAAACCCCAGTGAGCATCAAAGGTGTAGATGTTTTTGCTGTGTATTTTTTCAAGGAGAAGAAACTGAGGCTCATGAAGTATTCTGATAGATTGGAAGTTTCGCTTGAGCCGTTTAGTTTTGAGCTAATGACAGTGTCTTCGGTGAGAGTCTTTTCAAAAAGGTTGATACAGTTTGCTCCGATTGGGTTAGTGAACATGCTGAACTCCGGTGGTGCAGTTCAATCTCTGGAATTTGATGATAATGCAAGCTTGGTTAAGATTGGGGTGAGAGGTTTTGGGGAGATGAGGGTGTTTGCGTCTGAGAAACCAGTTTGCTGCAAAATCGATGGAGTTAGTGTGGAATTTGATTATGAGGAAAAAATGGTGAGAGTTCAAATTCTGTGGCCTAGTTCTTCGACGTTATCCTTGGTGGAGTTTTTATTTTGA 2385 0.4432 MAPPSITKTATPQEVISIIDIGNGNSPLFSITLDQSRNFLANGHPFLTQVPPNITTTTTTTPSSFLNLKSNKDTITNNNMLQQGCFVGFNTTEPKSHHVVPLGKLKGIKFMSIFRFKVWWTTHWVGTNGHELQHETQMLILDQNISLRRPYVLLLPILENNFRTCLQPGLNDHIDMCIESGSTHVTGSTFKACLYIHLSNDPYHLVKEAVKVIQTQLGTFKTLEEKTPPGIIDKFGWCTWDAFYLKVHPRGVREGVKSLTEGGCPPGFVIIDDGWQSISHDDDVNDDDSGMNRTSAGEQMPCRLIKYEENYKFREYKNRGNNGLGGFVRDLKEEFRSVESVYVWHALCGYWGGVRPKVLGMAEARVVVPKLSPGVKMTMEDLAVDKIMENGVGLVPPNLVQQMFDGLHSHLESAGIDGVKVDVIHLLELLSEDYGGRVELARAYYKALTSSVNKHFKGNGVIASMEHCNDFFLLGTEAISLGRVGDDFWCSDPSGDPNGTYWLQGCHMVHCAYNSLWMGNFIHPDWDMFQSTHPCAEFHAASRAISGGPIYVSDCVGNHNFKLLKSLVLPDGSILRCQHFALPTRDCLFEDPLHNGKTMLKIWNLNKYAGVLGLFNCQGGGWCPETRRNKSAFEFSQAVTCYASPEDIEWCNGKTPVSIKGVDVFAVYFFKEKKLRLMKYSDRLEVSLEPFSFELMTVSSVRVFSKRLIQFAPIGLVNMLNSGGAVQSLEFDDNASLVKIGVRGFGEMRVFASEKPVCCKIDGVSVEFDYEEKMVRVQILWPSSSTLSLVEFLF 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03942 794 FunFam Probable galactinol--sucrose galactosyltransferase 5 233 570 - -
Vivi3g03942 794 PANTHER - 32 792 IPR008811 -
Vivi3g03942 794 Pfam Raffinose synthase or seed imbibition protein Sip1 33 777 IPR008811 -
Vivi3g03942 794 Gene3D Aldolase class I 230 567 IPR013785 -
Vivi3g03942 794 SUPERFAMILY (Trans)glycosidases 230 576 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03942 Vivi-Chr3 68242052 68248208 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g03942 35 794 Glycoside Hydrolase AT5G40390 62.905 0.0 1023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03942 K06617 - gmx:100800308 1240.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g03942 3 68242052 68248208 Vivi3g03942 3 68242052 68248208 ECH