Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03912 ATGAATGGATCTCCGGATCCGTTGGATTCCTTTCCCCGTCTCCGTGTTCGCCAATCGGACGCCACGTCTCGCCGTTCATCCTTCGGCGCCGATTCCGAGTTGGAACGGTACTGTAGCGCTAACTCGGTGATGGGAACACCGAACACCAGTATGAGCATGTGCAGTGCTGTAACCGTTTTTCATGATTTCTCTGATATGGATTTTGGTTCTTCTAGAAGCTTCGATGATGGAAATAGTCGGAAGAATTTTAGGTATGGTTCGAGTGGATTGGAATTGTACGGTGACGACGGTGATGACCTAGGGATTGATTCGTCGGAGTTGATTGGGAATAAACGGAGGGAGGAATCTGATGGGAAGGGAAATGAGGGTGAAGTTGGGAGAAGAGAGATTGGGATTGAGATGGAAGAGGATGAGGAGTTTTCGGACGGTGAGGATTCTATGTTCAATTATGGGAGTGGATGTGAGGGTGATAATGAGAATGAGAAGGAGAAGAGTGAGTTTTATTCTTCAAGGAGGGTTCATTTATATGAGGATAAGGAAGTTCGAAATGAGAATCCGTTGTTTATGAATTCTTCTGTTGCTTTTGGTTCGCACGATTTGGATGATTTTTTGATTGAAAACGGTTTGGTTTCTGTAGAGGAAGATCTGTTTCAGAATCCGAGAGAAAATGATAATCGAGTTCAAGAGAATGAGGTAAGCTCCAGTCAAAAAGAGGAAAAGAACGAGGTCATTGTTGATAATGAAGTTGAAGAAACAAAAAATATTAGTGATCGAGAAGCTTTAGAAGAGGTAAGGGATAGGGAGAGGAACATTCCAGTTGCTTGTAATGAAGTTCAAGGTGCTGACGAATTGGTTGATTGTTTCAAAATGGATGATTTGGGTCTGTTGCCAGAAGAAGATCCTCAGGAGAGTTTGAATATCGCCGATTTTGGAAGTGAGGGAAAAGGTAATCGACATATTGATAGTGATGAAACTGGAACCTCTGGTGATGCTCAAAGGGAAAATCCGGAGTTGTTTAGTAGAGTTGATATAAGTTCTTCAAATGTATCTGTTGATGTAGGGAATGTAAATGCAAAATCAATTGAGAACCTTAAACCAATTGTGCTGTCATCAAATGGTGGAAGGAGGCAAACATTAGAGAGGATTTCCACTTCAACAAATGTATTAGAAAAAAGTCATGTGATATCTAAGATAGAGGACTCTGAGCTAAATGAATTCTATGACGAGGTTGTTCAGGACATGGAAGAAATTTTACTTGAGTCCAGGGATTCTAACGCTGCTAGGTTTTCCATGGGTAACAGAATGCTTGATCCACTAGTGTCTATGCCTTCAAGAGATGGTGGGTTGACCGCTTCTACTTCTGGTGCAGATGATGCTTATCTGCTTGTTCAGCGCCCAAGAAGAATAGATAGGATTGAAGTGGTAGGTGCAAGGCAGAAAACAGGGGATGTTTCTTTTAGTGAAAGATTGGTTGGGGTGAAGGAATACACTGTTTATAAAATAAAAGTGTGGAGTGGCAAGGATCAGTGGGAGGTTGAAAAGCGGTACCGTGATTTCTTGACTCTTCACCGTTGTATGAAAACCTTATTTAACGAGCAAGGCTGGACTTTACCTTTGCCTTGGTCTTCTGTTGAAAAGGAATCAAAGATATTTAGAAGTGCATCTCTTGATATTATTGCGAAGAGAAGTGTTCTCATTCAAGAATGTCTACAGTCTATTCTCTCTTCCAGGTTCTTCTCAAGTCCTCCAAGAGCACTGGTTTGGTTTTTATCCCCTGAAGATTCACATCTTAGTTCACCTGTGTCCAACTCTCCAGTGTCTCTGTCTTCTTTTACAAGAGGAGAAAACATTCAAAACTTTTCCACTTGGGGGAAGACCATATCACTTATTGTTGAAATTCCATCAAATAAATCAACGAGACAGCTGTTAGAAGCCCAACATCACAGATGCGCTGGATGCCATAAGCATTTTGATGATGGAAATACCTCAATTTGGGATTTTGTACAAACATTTGGATGGGGGAAGCCTCGACTATGTGAATATACTGGTCAACTGTTCTGTTCTTCTTGCCATACAAATGAGACTGCAGTCTTGCCAGCAAGGGTTTTACATCATTGGGATTTCACTCATTATCCAGTATCTCAGCTGGCTAAGTCATATCTGGATTCTATTCATGAACATCCCATGTTATGTGTCACTGCCGTTAATCCCTTCCTTTTGTCAAAGGTCCCTGCGTTGCTTCATGTTATGAATGTTAGGAAAAGGATAGGAACAATGCTTCCATATGTTCGCTGCCCATTCCGGAGATCTATCAACAGAGGTGTTGGAAATCGGAGATATCTGCTTGAAAGCAATGATTTTTTTGCTCTTAGAGATTTGATTGATCTTTCCAAAGGAGTCTTTGCAGCACTTCCCGTGATGGTGGAAACTGTGTCAAGGAAAATCCTTGAACACATTACTGATCAATGCCTTGTATGTTGTGATGTGGGAAACCCGTGTAGTGCCCGACAAGATTGCAGTGACCCATCTTCCCTCATTTTTCCATTTCAGGAAGACGATATTGAAAGGTGCAAATCTTGTCAGTCTGTTTTCCATAAGCCTTGCTTTAAAAAGCTTGTAAGTTGTCCTTGTGGGGAACAGCTCAGACTGAACAGGACAAGGAGTTTAAGTAACAGAGCAAGCCAATGGGGAGGTTTAGGCAAGGGACTGAGTTCAGGGTTGTCCCCTAATTTTCTTTCTGGATTATTTTCAAAAGAAAAGCCTGAGAAAACAAGGGAGCATCAAGGTGAAAATATCATCTTAATGGGTTCCTTACCAAGCAATTCTTTGTGA 2832 0.4156 MNGSPDPLDSFPRLRVRQSDATSRRSSFGADSELERYCSANSVMGTPNTSMSMCSAVTVFHDFSDMDFGSSRSFDDGNSRKNFRYGSSGLELYGDDGDDLGIDSSELIGNKRREESDGKGNEGEVGRREIGIEMEEDEEFSDGEDSMFNYGSGCEGDNENEKEKSEFYSSRRVHLYEDKEVRNENPLFMNSSVAFGSHDLDDFLIENGLVSVEEDLFQNPRENDNRVQENEVSSSQKEEKNEVIVDNEVEETKNISDREALEEVRDRERNIPVACNEVQGADELVDCFKMDDLGLLPEEDPQESLNIADFGSEGKGNRHIDSDETGTSGDAQRENPELFSRVDISSSNVSVDVGNVNAKSIENLKPIVLSSNGGRRQTLERISTSTNVLEKSHVISKIEDSELNEFYDEVVQDMEEILLESRDSNAARFSMGNRMLDPLVSMPSRDGGLTASTSGADDAYLLVQRPRRIDRIEVVGARQKTGDVSFSERLVGVKEYTVYKIKVWSGKDQWEVEKRYRDFLTLHRCMKTLFNEQGWTLPLPWSSVEKESKIFRSASLDIIAKRSVLIQECLQSILSSRFFSSPPRALVWFLSPEDSHLSSPVSNSPVSLSSFTRGENIQNFSTWGKTISLIVEIPSNKSTRQLLEAQHHRCAGCHKHFDDGNTSIWDFVQTFGWGKPRLCEYTGQLFCSSCHTNETAVLPARVLHHWDFTHYPVSQLAKSYLDSIHEHPMLCVTAVNPFLLSKVPALLHVMNVRKRIGTMLPYVRCPFRRSINRGVGNRRYLLESNDFFALRDLIDLSKGVFAALPVMVETVSRKILEHITDQCLVCCDVGNPCSARQDCSDPSSLIFPFQEDDIERCKSCQSVFHKPCFKKLVSCPCGEQLRLNRTRSLSNRASQWGGLGKGLSSGLSPNFLSGLFSKEKPEKTREHQGENIILMGSLPSNSL 943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03912 943 Pfam Putative zinc-RING and/or ribbon 677 881 IPR025258 -
Vivi3g03912 943 SMART DUF4206_2 677 883 IPR025258 -
Vivi3g03912 943 MobiDBLite consensus disorder prediction 106 145 - -
Vivi3g03912 943 CDD PX_domain 484 583 - -
Vivi3g03912 943 MobiDBLite consensus disorder prediction 298 335 - -
Vivi3g03912 943 ProSiteProfiles PX domain profile. 477 596 IPR001683 GO:0035091
Vivi3g03912 943 Pfam PX domain 504 591 IPR001683 GO:0035091
Vivi3g03912 943 SUPERFAMILY PX domain 489 596 IPR036871 GO:0035091
Vivi3g03912 943 MobiDBLite consensus disorder prediction 106 134 - -
Vivi3g03912 943 Gene3D - 478 599 IPR036871 GO:0035091
Vivi3g03912 943 PANTHER PLECKSTRIN HOMOLOGY DOMAIN CONTAINING PROTEIN 27 887 - -
Vivi3g03912 943 MobiDBLite consensus disorder prediction 220 242 - -
Vivi3g03912 943 MobiDBLite consensus disorder prediction 1 30 - -
Vivi3g03912 943 MobiDBLite consensus disorder prediction 314 330 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03912 - - gmx:100800081 1197.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g03912 3 67759183 67766372 Vivi3g03912 3 67759183 67766372 ECH