Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03906 ATGCTAAGAATCGCAGCATGCGCAAAGAGACTCGTGGGAACGGCGTCGTTTGAAGCGCCAAGTCCCGCCGTTAGGGTTCTTCCACGATTCTACCACGAGAGGGTGGTGGATCATTACGACAATCCCCGGAATGTTGGATCCTTCGACAAGAACGACCCGACGGTTGGTACCGGTCTTGTCGGAGCACCCGCGTGTGGTGATGTTATGAAGCTCCAGATTAAGGTTGATGAGGTCACCGGAAAAATCGTCGATGCTCGCTTTAAAACCTTTGGATGCGGGTCCGCCATTGCTTCCTCATCCGTCGCTACTGAATGGGTTAAGGGAAAGCAAATGGAAGAGGTTTTGACCATTAAGAACACTGAGATTGCAAAGCATTGCTTAAGAATATTTGCATCTTTGCTGTTATGTTTTGGACCTTTTGGTTTGTGCTATGTGCCCATCTCTAGGATTTAA 453 0.4857 MLRIAACAKRLVGTASFEAPSPAVRVLPRFYHERVVDHYDNPRNVGSFDKNDPTVGTGLVGAPACGDVMKLQIKVDEVTGKIVDARFKTFGCGSAIASSSVATEWVKGKQMEEVLTIKNTEIAKHCLRIFASLLLCFGPFGLCYVPISRI 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03906 150 PANTHER IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG 9 126 IPR002871 GO:0005506|GO:0016226|GO:0051536
Vivi3g03906 150 Gene3D - 30 136 - -
Vivi3g03906 150 Pfam NifU-like N terminal domain 31 125 IPR002871 GO:0005506|GO:0016226|GO:0051536
Vivi3g03906 150 CDD IscU_like 31 124 IPR002871 GO:0005506|GO:0016226|GO:0051536
Vivi3g03906 150 SUPERFAMILY SufE/NifU 30 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03906 Vivi-Chr3 67648745 67650346 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03906 K22068 - gmx:100806169 230.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g03906 3 67648745 67650346 Vivi3g03906 3 67648745 67650346 ECH