Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03904 ATGGCTGATTTGGTTCAAGAGGAACAAAGGGTTCTTGGAATTGACGAAGAGGGTCAAAATAAGGGAACTGAATCTGAGGGAAACAGCAACAACAGGCGTATACATTTGGAGGGTCAAGGAGAGAAAGATATGCAAGGGAATTCAATTCATAGATCCAGTTCTAGGCCACAACTTGATGTTAGTAAAGCTGAAATTCAATCTAATGTGGAGGATAAGTATCCCACCATTTTGTTGCCTAATCAATCTGATGATTTGTCTCACCTAGCTCTTGATATTGGAGGATCTTTGATAAAGTTGGTGTACTTTTCAAGACATGAAGGCCAATCAGATGATGATAAAAGGAAGAAAAGTTTGAAGGAGCGATTGGGGCTTTCTAATGGTAATAGGAGAAGCTTTCCTATTCTTGGTGGAAGGCTTCACTTTGTGAAGTTTGAAACAAGAAAGATCAACGAGTGCTTAGATTTCATTCATTCAAAGCAGCTTCACCGTGGGTTGGAGTCACGTTACCCAGATGCTGCGGCTAATGAAAATGCCATAATTAAGGCTACTGGAGGTGGAGCATACAAGTATACTGACCTTTTCAAAGAAAGACTTGGGGTTAGTCTTGACAAAGAGGATGAAATGAACTGTCTTGTGTCAGGAGCGAATTTCTTGCTTAAGGCAATTCGACATGAAGCTTTCACACACATGGAGGGCAAGAAAGAGTTTGTTCAAATTGACCATAATGATTTGTTCCCTTATCTTCTTGTTAACGTTGGTTCTGGTGTTAGTATGATCAAGGTTGATGGGGATGGAAAGTTTGAGAGGGTTAGTGGGACAAATGTTGGTGGTGGTACTTATTGGGGCTTGGGAAGACTGTTAACGAAGTGCAAGAGCTTTGATGAGTTGCTTGAGCTAAGCCAGAAAGGAGACAATAGAGCCATTGACATGCTTGTTGGGGACATTTATGGTGGTTTGGATTATTCTAAGATTGGTCTATCGGCTTCCACTATTGCTTCAAGTTTTGGGAAAACTGTATCAGAAAAAAAGGAGCTTGAAAACTACAGGCCTGAAGACATATCACTCTCTCTTCTACGGATGATTTCATACAATATTGGCCAGATAGCTTACTTAAATGCATTGCGATTCCGGTTGAAGAGAATATTTTTTGGAGGATTTTTCATCAGGGGTCATGCTTATACAATGGACACTCTTTCTTTTGCTGTTCAATACTGGTCTAATGGGGAAGCACAGGCAATGTTTTTGCGACATGAAGGCTTTCTGGGAGCTTTAGGTGCATTTATGAGTTATGAAGAGCATGGTTTAGATGACCTCATGGTGCATCAGTTAGTTGAAAGGTTTCCAATGGGTGCTCCATATACTGGAGGCAAGATACATGGCCCGCCACTTGGAGATTTGAATGAGAAGATTTCATGGATGGAGAAGTTTTTACAAATGGGAACAGAAATTACTGCACCTGTACCGATGACTCCTGTTGCTGGAACTACTGGACTTGGGGGTTTTGAAGTCCCTTTGTCAAAAGGAAGTGCTCTGCGATCTGATGCGAGTGCTCTAAATGTTGGTGTTCTCCATCTAGTACCAACTTTGGAAGTGTTTCCATTGTTAGCAGACCCAAAATTGTATGAGCCCAATACAATAGATCTTGCAGATCCCAGTGAATTAGAATATTGGCTCACAATTTTGTCAGAGCACTTGCCAGATCTTGTTGACAAGGCTGTTGCTAGTGAAGGTGGAACTGATGATGCCAAAAGAAGGGGTGATGCTTTTGCTCGTGCATTTTCTGCCCACTTGGCAAGGTTGATGGAGGAGCCTTCTGCATATGGGAAGTTAGGTCTGGCCAATCTACTGGAAATGAGGGAAGAATGCTTGAGGGAATTCCAGTTTGTTGATGCCTATAGAAGTATAAAGCAGAGGGAAAATGAAGCATCACTTGCCGTTTTACCTGACTTGTTTGTGGAACTTGATAGCATGGATGAGGAAACGAGATTGCTTACTCTAATTGAAGGTGTTCTTGCTGCAAACATTTTTGACTGGGGATCTCGTGCATGTGTGGATCTCTATCATAAAGGAACAATTATTGAAATTTACAGAATGAGTCGCAATAAAATGCGCAGACCATGGAGGGTGGATGACTTTGATGTCTTCAAAGAGAGAATGTTAGGGTCCGGAGGCAAGAAGAAGCCCCCTCATAAAAGAGCTTTACTTTTTGTTGATAATTCAGGTGCCGATATTGTTCTAGGGATGCTCCCTCTGGCTAGGGAGCTCCTTCGTCGTGGAACTGAAGTAGTTCTGGTTGCAAACTCGCTACCTGCTTTAAATGACGTGACTGCAATGGAGCTTCCTGATATTGTAGCTGAGGCTGCCAAGCATTGCGACATTCTAAGGCGAGCGGCTGAAGCTGGAGGCCTGCTTGTTGATGCGATGATTAATACAGATAGTTCTAAAGAAAATTCATCTTCAGTACCCTTGATGGTTGTTGAGAATGGATGTGGTAGTCCATGTATAGACTTAAGACAGGTCAGCTCTGAGTTGGCTGCTGCTGCAAAAGATGCCGATTTGATAATTTTGGAAGGGATGGGTAGATCTCTACATACTAACCTCTATGCTGAGTTTAAATGTGATGCTTTGAAGCTTGCGATGGTGAAAAATCAGAGATTGGCTGAAAAGTTAATTAAAGGGAACATATATGACTGTATTTGCAAATACCAGCCTTCTAGTTGA 2721 0.4197 MADLVQEEQRVLGIDEEGQNKGTESEGNSNNRRIHLEGQGEKDMQGNSIHRSSSRPQLDVSKAEIQSNVEDKYPTILLPNQSDDLSHLALDIGGSLIKLVYFSRHEGQSDDDKRKKSLKERLGLSNGNRRSFPILGGRLHFVKFETRKINECLDFIHSKQLHRGLESRYPDAAANENAIIKATGGGAYKYTDLFKERLGVSLDKEDEMNCLVSGANFLLKAIRHEAFTHMEGKKEFVQIDHNDLFPYLLVNVGSGVSMIKVDGDGKFERVSGTNVGGGTYWGLGRLLTKCKSFDELLELSQKGDNRAIDMLVGDIYGGLDYSKIGLSASTIASSFGKTVSEKKELENYRPEDISLSLLRMISYNIGQIAYLNALRFRLKRIFFGGFFIRGHAYTMDTLSFAVQYWSNGEAQAMFLRHEGFLGALGAFMSYEEHGLDDLMVHQLVERFPMGAPYTGGKIHGPPLGDLNEKISWMEKFLQMGTEITAPVPMTPVAGTTGLGGFEVPLSKGSALRSDASALNVGVLHLVPTLEVFPLLADPKLYEPNTIDLADPSELEYWLTILSEHLPDLVDKAVASEGGTDDAKRRGDAFARAFSAHLARLMEEPSAYGKLGLANLLEMREECLREFQFVDAYRSIKQRENEASLAVLPDLFVELDSMDEETRLLTLIEGVLAANIFDWGSRACVDLYHKGTIIEIYRMSRNKMRRPWRVDDFDVFKERMLGSGGKKKPPHKRALLFVDNSGADIVLGMLPLARELLRRGTEVVLVANSLPALNDVTAMELPDIVAEAAKHCDILRRAAEAGGLLVDAMINTDSSKENSSSVPLMVVENGCGSPCIDLRQVSSELAAAAKDADLIILEGMGRSLHTNLYAEFKCDALKLAMVKNQRLAEKLIKGNIYDCICKYQPSS 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03904 906 Gene3D - 308 419 - -
Vivi3g03904 906 PIRSF PanK_long 41 906 IPR015844 GO:0004594|GO:0015937
Vivi3g03904 906 Pfam Damage-control phosphatase ARMT1-like domain 614 892 IPR002791 -
Vivi3g03904 906 NCBIfam type II pantothenate kinase 87 429 IPR004567 GO:0004594|GO:0005524|GO:0015937
Vivi3g03904 906 FunFam Pantothenate kinase 1 87 224 - -
Vivi3g03904 906 Gene3D - 79 238 - -
Vivi3g03904 906 MobiDBLite consensus disorder prediction 9 40 - -
Vivi3g03904 906 SUPERFAMILY Actin-like ATPase domain 197 429 IPR043129 -
Vivi3g03904 906 Gene3D - 542 629 IPR035073 -
Vivi3g03904 906 Gene3D Uncharacterised protein PF01937, DUF89, domain 3 708 904 - -
Vivi3g03904 906 SUPERFAMILY Actin-like ATPase domain 86 225 IPR043129 -
Vivi3g03904 906 MobiDBLite consensus disorder prediction 45 60 - -
Vivi3g03904 906 FunFam Pantothenate kinase 2 225 410 - -
Vivi3g03904 906 PANTHER PANTOTHENATE KINASE 57 799 IPR004567 GO:0004594|GO:0005524|GO:0015937
Vivi3g03904 906 FunFam Pantothenate kinase 2 79 238 - -
Vivi3g03904 906 Pfam Fumble 87 428 IPR004567 GO:0004594|GO:0005524|GO:0015937
Vivi3g03904 906 MobiDBLite consensus disorder prediction 1 60 - -
Vivi3g03904 906 FunFam Pantothenate kinase 2 543 629 - -
Vivi3g03904 906 SUPERFAMILY AF1104-like 523 904 IPR036075 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03904 Vivi-Chr3 67605959 67621800 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03904 K24265 - gmx:100781580 1590.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g03904 3 67605959 67621800 Vivi3g03904 3 67605959 67621800 ECH