Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03899 ATGGATTCAACTTCAATTTCAACATTCCCTCAACAACAAGAGATGCAGGATCATCATCCTCACGAAGACTCTTCCACTGTTTCCGATTGCGAGAGCAGTGTTTCCGGCACCACCAGAGAGCTACAACAACAAAAACAAAATTCCGGTTCGTTTTTAGTTAGGCTTGGAGAAGGCGATGTTGTTCATGACCTAATCAAGACCAGATTCCTTCGCGGACTCGGTTTACTTTCGAAGCAAACGGAGATTCTAGCAATTCACAGAAACGCATGTTCCGACGTCGTTTCTCAAGCGCGCCTTCAATCCTTTCACCTTTACGCAGGAGCTGTTTCCAAACTTCGCGGTGGAAATTCAAATGTGAAATATGCTTGGTATGGAACTTCCTGTGAGAATGACGTAAGAGACATTCTTTCAAACGGTTTTAGTCATGTCCACGGTCATAGCCTGTGCCTCTCTCCAGATGATTCTCCTCTCCAAAGTGTGAAAAGTTGTGTTGTTGGAAGAGATGGCGTGAGGCATTTGATTTTGTGTAGGGTGATTTTAGGAAGAACGGAGATTGTGAAACCTGACACAAAACAATGTTATCCGAGCTGTGAGAATTATGATTCTGGTGTGGATAGTTTTTCAGCTCCAACTAAGTACATGATTTGGAGTAGTAGAATGAATACTCATGTTTGGCCTGCTTATGTTATAAGCTTCAGGGTTCCTTCATTCAAAGGGATTGAGAAGAGTGAAGAAGAGCATGTGAGACCAACTTCACCTTGGATGCCGTTTCAAAATTTAATTTCTGTGCTATCCAAGGATTTGCCATCGCTTGATATTGCTTTGATTTCCAAGTTCCACAAAGCTAAAAAGGAAAAGAAGATTTCGAGACATGAATTGATACAAAAAGTGAGGCAAATTGCTGGAGACAAGTTGCTGATTTCGGCCATCAAGTCTTACAGAGCAAAGAAAAAATCTGCAAATTTTCAGCAAACAAGGTCAAAGAATGACGACTAG 996 0.4167 MDSTSISTFPQQQEMQDHHPHEDSSTVSDCESSVSGTTRELQQQKQNSGSFLVRLGEGDVVHDLIKTRFLRGLGLLSKQTEILAIHRNACSDVVSQARLQSFHLYAGAVSKLRGGNSNVKYAWYGTSCENDVRDILSNGFSHVHGHSLCLSPDDSPLQSVKSCVVGRDGVRHLILCRVILGRTEIVKPDTKQCYPSCENYDSGVDSFSAPTKYMIWSSRMNTHVWPAYVISFRVPSFKGIEKSEEEHVRPTSPWMPFQNLISVLSKDLPSLDIALISKFHKAKKEKKISRHELIQKVRQIAGDKLLISAIKSYRAKKKSANFQQTRSKNDD 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03899 331 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 23 315 IPR044964 -
Vivi3g03899 331 Pfam RCD1-SRO-TAF4 (RST) plant domain 249 314 IPR022003 -
Vivi3g03899 331 ProSiteProfiles PARP catalytic domain profile. 39 252 IPR012317 GO:0003950
Vivi3g03899 331 MobiDBLite consensus disorder prediction 1 45 - -
Vivi3g03899 331 MobiDBLite consensus disorder prediction 27 45 - -
Vivi3g03899 331 Gene3D - 51 234 - -
Vivi3g03899 331 ProSiteProfiles RST domain profile. 248 319 IPR022003 -
Vivi3g03899 331 SUPERFAMILY ADP-ribosylation 52 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03899 Vivi-Chr3 67416271 67418796 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03899 - - pvu:PHAVU_009G178500g 433.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g03899 3 67416271 67418796 Vivi3g03899 3 67416271 67418796 ECH