Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03896 ATGGCAAATCAATCATCTGAGCTAGCCATTGATCAACTCAAGAAGCTTCTCAGTGAGAAAGAGGAACTTAATGAGGTGGCCACATCAAAAATTGAGGAGCTTATAGTTGAGTTGCAGAAATTGGGATGTGATCCACACCAAACTCCTGCTGAGAAGAGAATCACTGATGGCTTTGCTCATTTCAAGCACACCAACTTTGACAAGAATCCGGAATTGTATGATCGACTTGCTAAGGGACAATCCCCTAAGTTTATGGTATTTGCTTGCTCTGACTCTAGAGTGAGTCCTTCTGTTATTCTGAACTTTCAACCTGGTGAAGCTTTCATGGTCAGAAACATTGCTAACTTGGTCCCTCCATTTAATCAGTTAAGATATAGTGGAGTTGGTGCAACAATTGAGTATGCTATTACAGCTCTAAAGGTGCAAAACATCTTGGTTATTGGACATAGTCACTGCGGCGGAATTTCGAGGCTAATGAGTCATCCAAAGGATGGTTCTGCTCCATATGACTTCATAGATGATTGGGTGAAAATAGGTTTTCCAGCCAAAGTGAAGGTCCTAAAAGAATATCCAACCCATGATTTCAAAGAACAATGCAAATTCTGTGAATTGGAATCAGTGAAACACTCACTAGTGAACCTGCACACATACCCGTATGTTGTTACAGGAATAAAGAACAAGAATTTGGCATTGTTGGGAGGTTACTATGATTTTGTGAAAGGAGAATTCAAGCTTTGGAAGTATGAATCTCATGTATGA 759 0.4005 MANQSSELAIDQLKKLLSEKEELNEVATSKIEELIVELQKLGCDPHQTPAEKRITDGFAHFKHTNFDKNPELYDRLAKGQSPKFMVFACSDSRVSPSVILNFQPGEAFMVRNIANLVPPFNQLRYSGVGATIEYAITALKVQNILVIGHSHCGGISRLMSHPKDGSAPYDFIDDWVKIGFPAKVKVLKEYPTHDFKEQCKFCELESVKHSLVNLHTYPYVVTGIKNKNLALLGGYYDFVKGEFKLWKYESHV 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03896 252 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 89 96 IPR015892 GO:0004089|GO:0008270|GO:0015976
Vivi3g03896 252 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 2. 133 153 IPR015892 GO:0004089|GO:0008270|GO:0015976
Vivi3g03896 252 Pfam Carbonic anhydrase 85 242 IPR001765 GO:0004089|GO:0008270
Vivi3g03896 252 CDD beta_CA_cladeB 57 246 IPR045066 GO:0004089|GO:0008270
Vivi3g03896 252 SMART Pro_CA_2 77 247 IPR001765 GO:0004089|GO:0008270
Vivi3g03896 252 SUPERFAMILY beta-carbonic anhydrase, cab 52 249 IPR036874 GO:0004089|GO:0008270
Vivi3g03896 252 PANTHER CARBONIC ANHYDRASE 30 249 IPR001765 GO:0004089|GO:0008270
Vivi3g03896 252 Gene3D Carbonic anhydrase 45 252 IPR036874 GO:0004089|GO:0008270
Vivi3g03896 252 Coils Coil 3 37 - -
Vivi3g03896 252 FunFam Carbonic anhydrase 46 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03896 Vivi-Chr3 67231629 67233699 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03896 K01673 - gmx:547671 387.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g03896 3 67231629 67233699 Vivi3g03896 3 67231629 67233699 ECH