Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03892 ATGCCGGGAATTGTTACAAATGGTGTTCATGATGAAGGGGGGACTAATGAGATGAATGAGAATCGTTCCCCAGCTAAGGAAGCTGTAAATCTGATTAAGTCTCCAAGGGGTTCAATGAGTCCGCAGACGCGTCGCAATTTCCCGGTTGATGATGGGGCGGTTGAGCCGTCGATCGAGCAGCTTTATGAAAATGTGTGTGACATGCAGAGTTCTGATCGGTCTCCGTCGAGGCAAAGTTATGGATCTGATGGGGATGAGTCTAGGATTGATTCGGAGCTGCATCATTTGGTTGGAGGACGGATGAGGGAATTGGAGATAATGGAAGAGGAGGTGGAGGTGGAAAGAAGGCCTGGTGAGAGTTCTAGTTGTGAAACATCTTCTGGAGTTGGTAGTTTATCGAATGATAAGAAGTTGGATAAGGTGTCTGAGATTCGGACTGGGACTAAAAGTCTGGTTTCCTCGGAAAAATCTGTCAAAGCATTGAATTCTTCATCGCCGGGGTCTGACATTTCACCGAAATCTAAACCCAAAGGAAAAAGTCCTTCTGTTAAACCTCCGCTGGAGAGAAAGAATGATAAGCCTTTGAAAAAACCAACTAGAGGAGTTAATGGCGTGAAGAGTTCGAAGAATTCTCCTTTGGGAAAGTCAGTGCTACAGAGCCGTGTTGAGAATTCGGCTGAATCAGAATTAGATAGACCAGACCGGGCACCCGTATTACTAAAGCAAGCAAGAGATCTTATTTCGTCAGGAGATAATCCATACAAAGCTCTTGAACTAGCTCTTCAAGCAATGAAACTTTTTGAGAAATTCAGTAAGGGGAAACCTAATTTGGAATTGGTCATGTGTTTACATGTTACAGCCGCAATATATTGCAGCTTGGGTCAGTACAGTGAGGCAATTCCGATTCTTGAGCGATCAATTGAAATTCCTGTTAGTGTGGAGAGTCAACAGCACGCTCTTGCTAAATTTGCCGGTCACATGCAACTGGGAGACACCTATGCTATGTTGGGCCAGCTTGAGAATTCAATTATGTGCTACACTGCTGGGTTTAAAGTCCAGAGGGAGATTTTGGGAGAGACAGACCCAAGAGTTGGCGAAACTTGCCGGTATCTGGCTGAAGCTAATGTTCAAGCTTTGCAATTTAATGAAGCAGAGAAACTCTGTCAAATGGCTCTTGACATTCATCGAGCAAATAGTTCAGCACCATCTATTGAAGAAGCAGCTGATAGGAGGCTTATGGGTCTCATATGTGAAACGAAGGGGAATCATGAAGCAGCTCTTGAACACCTTGTTTTAGCCAGCATGGCAATGGTAGCAAATGGCCAGGAAGTGGAAGTGGCTTCTGTTGACTGCAGCATCGGAGACGCATACTTAGCTTTGTCTCGATTTGATGAAGCTGTTTTTGCGTATGAAAAAGCGTTAGCTGTTTTAAAGACCAACAAAGGAGAGAATCATCCAGCAGTAGGATCAGTCTTTGTACGCTTGGCCGACTTGTATAACAGGACAGGTAATATAAGGGAATCAAAATCGTATTGTGAGAATGCACTTAAAATATACGAGAATCCAATGCCTGGAGTTACTCCAGAAGAGATTGCTAGCGGTCTTACAAATCTGTCAAGTATCTACGAGTCAATGAATGAGGTTGAACAGGCACTCAAGTTACTGCATAAAGCATTGGAGATATATAATGATGCTCCTGGGCAACAAGGTGCAATAGCAGGAATCGAAGCTCAGATTGGGGTCATGAACTACATGTTGGGAAACTATACTGAATCTTACAACAATTTGAAAAATGCTATTTCAAAGCTTCGTGCTATTGGGGAGAAGAAATCTTCCTTTTTTGGTATAGCTCTTAATCAACTGGGGCTCGCCTGTGTACAGCGTTATGCCTTACCTGAGGCAATAGAATTATTTGAGGAAGCAAAGAGTATTTTGGAACAAGAGTTGGGGCCTTATCACCCTGAAACACTCGGAGTATGTAGTAATCTTGCAGGCACATATGATGCAATTGGAAGGCTCGATGATGCAATTAAAATTCTGGAGTATGTTGTTGGTATGAGGGAAGAAAAGCTTGGGACAGCAAATCCCGACGTGGATGATGAGAAGAGAAGGTTGAGTGAGCTGTTGAAGGAAGCCGGTAGAGTTCGGAATAGAAAAGTCAGGTCACTAGAGAACCTTTTTGACGGCAATGCTCGCACTTTAAACAACCTTGTCATCAACGCCTGA 2226 0.4362 MPGIVTNGVHDEGGTNEMNENRSPAKEAVNLIKSPRGSMSPQTRRNFPVDDGAVEPSIEQLYENVCDMQSSDRSPSRQSYGSDGDESRIDSELHHLVGGRMRELEIMEEEVEVERRPGESSSCETSSGVGSLSNDKKLDKVSEIRTGTKSLVSSEKSVKALNSSSPGSDISPKSKPKGKSPSVKPPLERKNDKPLKKPTRGVNGVKSSKNSPLGKSVLQSRVENSAESELDRPDRAPVLLKQARDLISSGDNPYKALELALQAMKLFEKFSKGKPNLELVMCLHVTAAIYCSLGQYSEAIPILERSIEIPVSVESQQHALAKFAGHMQLGDTYAMLGQLENSIMCYTAGFKVQREILGETDPRVGETCRYLAEANVQALQFNEAEKLCQMALDIHRANSSAPSIEEAADRRLMGLICETKGNHEAALEHLVLASMAMVANGQEVEVASVDCSIGDAYLALSRFDEAVFAYEKALAVLKTNKGENHPAVGSVFVRLADLYNRTGNIRESKSYCENALKIYENPMPGVTPEEIASGLTNLSSIYESMNEVEQALKLLHKALEIYNDAPGQQGAIAGIEAQIGVMNYMLGNYTESYNNLKNAISKLRAIGEKKSSFFGIALNQLGLACVQRYALPEAIELFEEAKSILEQELGPYHPETLGVCSNLAGTYDAIGRLDDAIKILEYVVGMREEKLGTANPDVDDEKRRLSELLKEAGRVRNRKVRSLENLFDGNARTLNNLVINA 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03892 741 MobiDBLite consensus disorder prediction 1 234 - -
Vivi3g03892 741 Pfam Tetratricopeptide repeat 532 565 - -
Vivi3g03892 741 SUPERFAMILY TPR-like 254 399 IPR011990 GO:0005515
Vivi3g03892 741 SMART tpr_5 365 398 IPR019734 GO:0005515
Vivi3g03892 741 SMART tpr_5 657 690 IPR019734 GO:0005515
Vivi3g03892 741 SMART tpr_5 280 313 IPR019734 GO:0005515
Vivi3g03892 741 SMART tpr_5 532 565 IPR019734 GO:0005515
Vivi3g03892 741 SMART tpr_5 573 606 IPR019734 GO:0005515
Vivi3g03892 741 SMART tpr_5 447 480 IPR019734 GO:0005515
Vivi3g03892 741 SMART tpr_5 489 522 IPR019734 GO:0005515
Vivi3g03892 741 SMART tpr_5 323 356 IPR019734 GO:0005515
Vivi3g03892 741 SMART tpr_5 615 648 IPR019734 GO:0005515
Vivi3g03892 741 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 42 731 - -
Vivi3g03892 741 Pfam Tetratricopeptide repeat 446 521 - -
Vivi3g03892 741 Pfam Tetratricopeptide repeat 616 683 - -
Vivi3g03892 741 Gene3D Tetratricopeptide repeat domain 609 718 IPR011990 GO:0005515
Vivi3g03892 741 Gene3D Tetratricopeptide repeat domain 434 608 IPR011990 GO:0005515
Vivi3g03892 741 MobiDBLite consensus disorder prediction 182 199 - -
Vivi3g03892 741 SUPERFAMILY TPR-like 444 565 IPR011990 GO:0005515
Vivi3g03892 741 Coils Coil 545 565 - -
Vivi3g03892 741 SUPERFAMILY TPR-like 576 714 IPR011990 GO:0005515
Vivi3g03892 741 ProSiteProfiles TPR repeat profile. 532 565 IPR019734 GO:0005515
Vivi3g03892 741 ProSiteProfiles TPR repeat profile. 447 480 IPR019734 GO:0005515
Vivi3g03892 741 Coils Coil 698 718 - -
Vivi3g03892 741 MobiDBLite consensus disorder prediction 146 171 - -
Vivi3g03892 741 MobiDBLite consensus disorder prediction 83 119 - -
Vivi3g03892 741 MobiDBLite consensus disorder prediction 63 82 - -
Vivi3g03892 741 Gene3D Tetratricopeptide repeat domain 218 433 IPR011990 GO:0005515
Vivi3g03892 741 MobiDBLite consensus disorder prediction 203 224 - -
Vivi3g03892 741 Pfam Tetratricopeptide repeat 287 313 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03892 Vivi-Chr3 67189652 67193303 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03892 - - gmx:100791625 1090.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g03892 3 67189652 67193303 Vivi3g03892 3 67189652 67193303 ECH