Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03888 ATGGCAACAACACCTCACCCAGCCATGAAAAAATCATGGTCGAGAGGCTCCGACTCAACTCAGTTCGAATCACCCGCACGCTTCTGCTCTCCCTTACGATGGGACGCAGCAGACTCGCCGGAATACCGATCACCAGCAAACTCGCCCGGAAAGATGGTAGACAACTCAATGGCAGTAATTACCGTCGACAAGCCAAAGCAGATTTCTCACGAGAAACTCCCTGACCAGCGGAAGCTTCCACAGGAGAATAATCTTGCGGTGTTCAACCTACCAGTGAGAGAGGAGCCTCAACGGCAGGCTACGAAAGTGGAGACTTCTGAAAAAGGTAGTGAGCGGAGATTGAGGTCGGCTCCGGTAAGCTGTACGGCGGAGGAGGTTACGAGAAAGGCGGGTTTAGGGTTCCGGCTATGCGAGATGGTGGTGTGTCTGATTTCGTTTTCGGTTATGGCTGCAAATAAGACGCAAGGTTGGAGTGGGGACTCTTATGATCGTTACAAAGAATACAGGTATTGTTTATCAATGAATGTTATCGGATTTGCATACTCAGGATTACAAGCTTGTGATTTAGCTTTTCAACTAGTCACAGGAAAACACATGATAAGCCATCATCTTCGCTATCACTTTCAGTTCTTCTTGGATCAGGTTGTGGCATATCTTCTGATATCAGCATCATCCTCTGCAGCGACAAGGGTGGATGATTGGCAGTCAAATTGGGGGAAAGATGAGTTCACTGAGATGGCTACTGTTTCGGTTGGAATGTCATTTCTAGCTTTTGTTGCATTTGCTATGAGCTCACTCATCTCTGGTTACATCCTCTGTAATGGCCGCAACTCCGTGTAA 840 0.4774 MATTPHPAMKKSWSRGSDSTQFESPARFCSPLRWDAADSPEYRSPANSPGKMVDNSMAVITVDKPKQISHEKLPDQRKLPQENNLAVFNLPVREEPQRQATKVETSEKGSERRLRSAPVSCTAEEVTRKAGLGFRLCEMVVCLISFSVMAANKTQGWSGDSYDRYKEYRYCLSMNVIGFAYSGLQACDLAFQLVTGKHMISHHLRYHFQFFLDQVVAYLLISASSSAATRVDDWQSNWGKDEFTEMATVSVGMSFLAFVAFAMSSLISGYILCNGRNSV 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03888 279 PANTHER CASP-LIKE PROTEIN 4A4 108 273 - -
Vivi3g03888 279 MobiDBLite consensus disorder prediction 97 113 - -
Vivi3g03888 279 MobiDBLite consensus disorder prediction 1 26 - -
Vivi3g03888 279 MobiDBLite consensus disorder prediction 93 113 - -
Vivi3g03888 279 Pfam Casparian strip membrane protein domain 127 260 IPR006702 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03888 Vivi-Chr3 67050607 67052389 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03888 - - gmx:100789870 325.479
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g03888 3 67050607 67052389 Vivi3g03888 3 67050607 67052389 ECH