Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03884 ATGAAAATTCACTTCATCTTCTTGCTCTTCTCACTCTCTTTTTTCCATGGTTCTGTAGTAACCATTGGCAACGAAGGAATCACTGAAACACAAGAATATTCTTTCAAACAAAAGACAAACCCTTTCAGTCCCAAAGCCTCACTCATTCGTTACTGGAACACAAAAATCTCTAACAAACTTCCAAATCCAATCCCTAATTTCTTTCTCTCTAAAGCTTCCCCTCTCACACCACAACACTACGCCAATTTAGTAAATCTACTCAAACAAGAGCCCTTATCTGCAAATTTCCATAATTCCCTCTGCTCCACACCATACTTATTCTGCTCCTTCGACCACCCAAGCCAATATTACCAATCCAAAAAATCCACCACCAAGAATGATGCCAACTTCGCACTCTACTCAAACAAAAAATTCGCAACTTATGGTTCGTCTCGACTCGGTGGAGTCGACTCGTTCAAAAACTATTCAAACGGGTTAAACACAAACAACGATTCGTTCAAAAAATACAGCACAACCTCAACTCGCCATAGCGGACAATTCAACAGCTACGCAGAAAACGGCAATGTAGCTAACACAAACTTCACCAGCTACAGTTCCGGTTCATCTTCCGGCACCGGCGAATTCAAAAGCTACGATAAACTCGTCAATGATCCAAACCTAGGTTTCACCACCTACGACTCCTCTGCTAGCAACCACAAACTCTCCTTCGCAAGCTACGGCAACGAAACAAATTCCGGATCAGAATCATTCAACAGCTACGGCAAACGCGTCCGCAGCGGCAACAGCGATTTCACCAATTACGCTGTGAGTTCCAACATTCTTCAATCATCTTTCACCGGTTACGGTGAACTCGGAACTGGATCCGCCAATGATTCTTTCACATCGTACAGTTTCAACGGTAATAATCCCCGGAGCACTTTCAAAACCTACGGCGCCGGTTCTATTTCAGGCTCCGATACATTCGTCAGTTACCGGAATCGCGCCAACGTCGGCGATGATTCATTTCAAAGCTACGGTTCAAAATCTAAATCCGGCGCCGCCTCATTCACGAACTACGGGCAATCGTTTAACGAAGGAAACGACACTTTCACTGAATATGGAAAAGGTGCCACTGGTAAAACCGCGATTGGATTCAAAATTTACGGATTGGGACGCGCGTTCAAAGGCTACAACAAAAACGGCGTGTCGTTTTCTAGCTACAACAATTTCACTACATCCAGTGGCAAAACCGTGAATAAGTTCGTTGAGAGGGGTAAATTTTTCAGAGAGTCAATGTTGAAAGAAGGAAATGTAATGGTCATGCCAGATATTAGAGATAAAATGCCTGAAAGGTCGTTTTTACCCCTATCTATTTCTTCGAAATTACCATTTTCATCCTTGATGTTGGAGGATATAAAGAAAACCTTCCACGCGCGGGAGGGTTCAGCGACAGCGCGCGTGATTAAAAACGCGCTTGGAGAGTGCGAGAGGGCTCCTAGCGTGGGTGAGACAAAACGGTGCGTTGGATCCGCTGAGGCTATGGTTGATTTTGCGGTTTCTGTATTGGGTCCCAATGTGGTTGTGAAAACAACTGAGAATGTGAATGGGTCAAAAAACAGTGTGATGATTGGAAAAGTCTACGGAATCAACGGTGGAAAAGTGACTAAATCGGTTTCATGTCATCAAACTCTGTACCCTTACTTATTGTATTATTGTCACTCTGTCCCCAAAGTGAGAGTTTATGAAGCTGAAATTCTTGACTTGGAAACTAAGTTAAAGATTAATCATGGTGTTGCCATCTGTCATATTGACACGTCATCATGGGGCCCAGAGCATGGTGCTTTCATAGCTTTGGGGTCGGAACCTGGAAAAATTGAGGTTTGCCATTGGATTTTCGAGAATGATATGACGTGGACCATTGCTAGTTGA 1908 0.4366 MKIHFIFLLFSLSFFHGSVVTIGNEGITETQEYSFKQKTNPFSPKASLIRYWNTKISNKLPNPIPNFFLSKASPLTPQHYANLVNLLKQEPLSANFHNSLCSTPYLFCSFDHPSQYYQSKKSTTKNDANFALYSNKKFATYGSSRLGGVDSFKNYSNGLNTNNDSFKKYSTTSTRHSGQFNSYAENGNVANTNFTSYSSGSSSGTGEFKSYDKLVNDPNLGFTTYDSSASNHKLSFASYGNETNSGSESFNSYGKRVRSGNSDFTNYAVSSNILQSSFTGYGELGTGSANDSFTSYSFNGNNPRSTFKTYGAGSISGSDTFVSYRNRANVGDDSFQSYGSKSKSGAASFTNYGQSFNEGNDTFTEYGKGATGKTAIGFKIYGLGRAFKGYNKNGVSFSSYNNFTTSSGKTVNKFVERGKFFRESMLKEGNVMVMPDIRDKMPERSFLPLSISSKLPFSSLMLEDIKKTFHAREGSATARVIKNALGECERAPSVGETKRCVGSAEAMVDFAVSVLGPNVVVKTTENVNGSKNSVMIGKVYGINGGKVTKSVSCHQTLYPYLLYYCHSVPKVRVYEAEILDLETKLKINHGVAICHIDTSSWGPEHGAFIALGSEPGKIEVCHWIFENDMTWTIAS 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03884 635 Pfam BURP domain 420 632 IPR004873 -
Vivi3g03884 635 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 30 634 - -
Vivi3g03884 635 SMART BURP_2 418 634 IPR004873 -
Vivi3g03884 635 ProSiteProfiles BURP domain profile. 420 634 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03884 Vivi-Chr3 67006496 67008852 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03884 - - lja:Lj1g3v0411530.1 902.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g03884 3 67006496 67008852 Vivi3g03884 3 67006496 67008852 ECH