Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03870 ATGGCTGGAGGAGGAGCTCCAGCTCCTAAATCAGATGAACCACAACCTCATCCACCAAAGGATCAACTTCCCAACATTTCTTACTGCATTACTAGTCCACCTCCATGGCCTGAGGCTATACTTCTCGGTTTTCAACATTTTCTAGTGATGCTTGGCACAACTGTGCTCATTCCAACTGCTCTTGTTCCTCAGATGGGAGGTGGAAATGCGGAGAAGGCTAGAGTTATTGAAACTCTACTTTTTGTTGCTGGTATTAATACGTTGGTGCAAACTCTCTTTGGAAGTCGACTACCTGCAGTAATTGGAGGGTCTTATACATATGTGGCTACCACAATCTCGATTATTCTAGCTGGTCGATTCAGTGGTGAACCAGATCCAGTAGAGAAATTCAAGAAGATAATGAGGGCAGTTCAGGGTGCTCTTATTGTTGCTTCAACTCTTCAGATAGTACTAGGCTTTAGTGGCCTTTGGCGTAATGTTGCAAGGTTCTTGAGTCCACTTTCAGCAGTTCCGTTAGTTTCACTTGTTGGTTTTGGGTTGTACGAGTTAGGTTTTCCTGGGGTTGCTAAATGTGTCGAAATTGGACTGCCAGAGCTTATATTGCTAGTATTTGTTTCACAGTATGTGCCCCACGTGTTACATTCGGGGAAAAATATCTTTGACCGTTTTGCCGTTTTATTTACCATTGTAATTGTGTGGATATATGCTCATCTACTCACCGTTGGAGGGGCCTATAACGGTGCTCCACCGAAAACTCAGTCATCCTGCCGCACTGATCGTGCTGGACTTATAGATGCCGCTCCTTGGATCAGAGTTCCCTACCCCTTTCAATGGGGAGCACCTACATTTGATGCAGGTGAAGCATTTGCCATGATGATGGCATCTTTTGTTGCTCTTGTAGAGTCTACCGGAGCTTTCATTGCCGTATATAGGTATGCAAGTGCAACGCCATTACCACCTTCTATTCTTAGTCGAGGTATCGGTTGGCAGGGAGTTGGCATTCTGTTATCAGGATTGTTTGGAACAATTACCGGATCGTCCGTGTCTGTAGAAAACGCAGGTCTTTTGGCTTTGACGCGTGTTGGCAGTAGAAGAGTTGTGCAGATATCTGCCGGATTCATGATTTTCTTTTCAATTCTCGGAAAATTCGGAGCAGTTTTCGCCTCTATCCCACCTTCAATTATTGCTGCACTGTACTGCTTATTCTTTGCTTATGTTGGTGCTGGAGGTCTTAGTTTTCTTCAGTTCTGCAACCTTAACAGTTTTAGAACAAAGTTCATATTAGGCTTCTCAATATTCTTGGGCCTGTCTATACCACAGTACTTCAACGAGTATACAGCAATCAACGGTTTCGGTCCGGTCCACACCGGCGGAAGATGGTTCAACGATATAATCAACGTTCCGTTCCAATCAAAAGCATTTGTAGCTGGTGTTGTGGCGTATTTCCTCGACAACACTTTACATAAGAACGAATCGTCTATTAGAAAGGACAGAGGAAAACATTGGTGGGACAAGTACAAGTCATTCAAGGGTGACTCAAGAAGTGAGGAGTTCTATTCACTGCCTTTTAATCTGAACAAGTATTTTCCATCTGTTTAA 1599 0.4378 MAGGGAPAPKSDEPQPHPPKDQLPNISYCITSPPPWPEAILLGFQHFLVMLGTTVLIPTALVPQMGGGNAEKARVIETLLFVAGINTLVQTLFGSRLPAVIGGSYTYVATTISIILAGRFSGEPDPVEKFKKIMRAVQGALIVASTLQIVLGFSGLWRNVARFLSPLSAVPLVSLVGFGLYELGFPGVAKCVEIGLPELILLVFVSQYVPHVLHSGKNIFDRFAVLFTIVIVWIYAHLLTVGGAYNGAPPKTQSSCRTDRAGLIDAAPWIRVPYPFQWGAPTFDAGEAFAMMMASFVALVESTGAFIAVYRYASATPLPPSILSRGIGWQGVGILLSGLFGTITGSSVSVENAGLLALTRVGSRRVVQISAGFMIFFSILGKFGAVFASIPPSIIAALYCLFFAYVGAGGLSFLQFCNLNSFRTKFILGFSIFLGLSIPQYFNEYTAINGFGPVHTGGRWFNDIINVPFQSKAFVAGVVAYFLDNTLHKNESSIRKDRGKHWWDKYKSFKGDSRSEEFYSLPFNLNKYFPSV 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03870 532 Pfam Permease family 38 442 IPR006043 GO:0016020|GO:0022857|GO:0055085
Vivi3g03870 532 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 7 530 - -
Vivi3g03870 532 NCBIfam purine/pyrimidine permease 40 438 - -
Vivi3g03870 532 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03870 Vivi-Chr3 66668227 66672599 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g03870 8 532 Organic Solute Cotransporters AT5G49990 80.038 0.0 853
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03870 - - gmx:100812585 1000.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g03870 3 66668227 66672599 Vivi3g03870 3 66668227 66672599 ECH
Vivi1g02097 1 44373811 44379798 Vivi3g03870 3 66668227 66672599 PCT