Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03862 ATGAAGTCACAACTTCTCGCCATTTCTCTCATCTTCATCTTCTCACTCCTCATCTCTTCCTCCAAACCGACCCTATCTTCCACCCTCGGCATTGATTCCATTTCCCGCATTCTTCAAATCCAAGACCGAGAAAGAGCTCCTCCGTCCATCCAGGAAGCTGCCGCCCGCTCCCTCCTCACCCGATTGCTGCCTTCCCATTCCTCTTCCTTCCACTTCCGCATCCTCTCCAAGAAGCAATGCGGAGGTGAATATTGTTTCACTATCAATAACCATCCTTCTTCTGCAACTCCAGGGAGTCCTCAAATTCGAATTGAAGGAACTACAGGAGTGGACATTGTTGCTGGTTTGCATTGGTACTTGAAGAATTGGTGTGGTTCACATATATCTTGGGACAAAACTGGTGGCTCTCAACTATTTGCAGTACCCAATGTGGGGTTTCTGCCACGTGTTCACGATGCCGGAATCTCGGTTCGGAGGCCTGTTCCATGGAGCTATTACCAGAATGCTGTTACTTCTAGCTATTCTTTTGCTTGGTGGGACTGGAAAAGATGGGAAAAGGAAATCGACTGGATGGCTCTGCAAGGTGTCAACTTGCCACTTGCATTTACGGGACAGGAGGCTATCTGGCAGAAAGTGTTCAAGGACAAATTTAACATGAGCATTTCAAATTTGGATGATTTCTTTGGAGGCCCAGCATTTCTCGCCTGGTCACGTATGGGAAACTTACATGGGTGGGGTGGACCGCTTCCACAGAGCTGGTTTGATCAGCAATTAATTTTACAGAAGAAAATTCTTGCCAGAATGTATGAGCTCGGAATGACTCCTGTCCTGCCAGCTTTTTCTGGAAATGTCCCTGCTGCTCTGAAATATATATTTCCATCAGCAAAAATAACACGCTTGGGAAATTGGTTTTCTGTTAAGAGTGACCCCAAATGGACCTGCACTTATCTTCTCGATGCAACTGATCCCTTGTTTGTTGAGATCGGTAAAGCATTTGTTGAACAACAACTGCAAGAGTATGGAAGATCCAGCCACATATACAACTGCGATACCTTTGATGAAAACACCCCACCCGTTGATGATCCAGAGTACATTTCTTCATTAGGTGCAACAATCTTTAAGGGAATGCAAAGTGGGGATAATGATGCTGTTTGGTTGATGCAGGGATGGCTATTTTCATATGATCCGTTCTGGAGACCTCCTCAAATGAAGGCCCTTTTGCATTCTGTTCCTGTGGGAAATCTGGTGGTTCTTGACCTGTTTGCTGAAGTTAAACCCATATGGACTACCTCGGAGCAGTTTTATGGTGTTCCATACATCTGGTGTATGTTGCACAATTTTGCAGGAAACATTGAGATGTATGGGATACTAGATGCTGTAGCATCTGGTCCAATTGAAGCACGAACAAGTGTTAACTCAACAATGGTTGGAGTTGGAATGTCGATGGAAGGTATCGGACAAAATCCCATTGTTTATGATCTCATGTCTGAAATGGCATTTCAGCACAAGAAAATTGATGTTAAGGCGTGGGTTGATTTGTATTCAACTAGACGATATGGTAGACAAGTTCCTTCGGTACAAGAGGGATGGAATGTCTTGTATCATACTATTTACAATTGCACGGATGGAGCCTATGACAAAAACAGAGATGTTATTGTAGCATTCCCAGACGTCGACCCTTCCTTACTTTCAGTACAGCATGAACACTCTAGTTCCCAAGCTAAGACAAACTCTAGAACAATTATCAAGGAAGTAACTGCTTCATTTGATCAACCTCACTTATGGTATTCAACATCTGAAGTAATTTATGCATTGGAGCTTTTTATATCTAGTGGAGACGAACTTTCAAAAAGTAGTACTTATAGGTATGACCTAGTTGATCTCACCAGACAAGTTTTAGCGAAATATGCAAATCAGCTGTTCTATAAGGTCATTGAGGCATACCAATCACAAGATATCCATGGAGTGACCCTACTCAGCCAAAGATTTTTAGACCTGGTGGAAGATTTGGACGCATTATTGGCTTGCCATGATGGGTTTCTTCTAGGCCCCTGGTTAGATAGTGCAATACAGCTAGCTCAAAATGAAGAACAGAAGAGACAGTTTGAGTGGAATGCTAGAACACAAATCACCATGTGGTTTGACAACACAGATGAGGAAGCCAGTCTGCTTCGTGACTATGGAAACAAGTATTGGAGTGGGCTTCTGCATGATTATTATGGTCCCAGAGCTGCTATTTATTTTAAATATTTAAGAGAAAGCTTAGAAAAACACGAGCATTTCAAGCTAAAGGAATGGAGAAGAGAGTGGATAAAACTTACCAATGATTGGCAAAGCCGTAGAAATATATTTCCAGTTGTAAGTAGAGGAGATGCTTTCAACACTTCTCGGTGGCTCTTCAACAAATACCTCAACCTTACCAATCCAGAGACACCGGAGAGGTGGACTGAACATTAG 2457 0.4298 MKSQLLAISLIFIFSLLISSSKPTLSSTLGIDSISRILQIQDRERAPPSIQEAAARSLLTRLLPSHSSSFHFRILSKKQCGGEYCFTINNHPSSATPGSPQIRIEGTTGVDIVAGLHWYLKNWCGSHISWDKTGGSQLFAVPNVGFLPRVHDAGISVRRPVPWSYYQNAVTSSYSFAWWDWKRWEKEIDWMALQGVNLPLAFTGQEAIWQKVFKDKFNMSISNLDDFFGGPAFLAWSRMGNLHGWGGPLPQSWFDQQLILQKKILARMYELGMTPVLPAFSGNVPAALKYIFPSAKITRLGNWFSVKSDPKWTCTYLLDATDPLFVEIGKAFVEQQLQEYGRSSHIYNCDTFDENTPPVDDPEYISSLGATIFKGMQSGDNDAVWLMQGWLFSYDPFWRPPQMKALLHSVPVGNLVVLDLFAEVKPIWTTSEQFYGVPYIWCMLHNFAGNIEMYGILDAVASGPIEARTSVNSTMVGVGMSMEGIGQNPIVYDLMSEMAFQHKKIDVKAWVDLYSTRRYGRQVPSVQEGWNVLYHTIYNCTDGAYDKNRDVIVAFPDVDPSLLSVQHEHSSSQAKTNSRTIIKEVTASFDQPHLWYSTSEVIYALELFISSGDELSKSSTYRYDLVDLTRQVLAKYANQLFYKVIEAYQSQDIHGVTLLSQRFLDLVEDLDALLACHDGFLLGPWLDSAIQLAQNEEQKRQFEWNARTQITMWFDNTDEEASLLRDYGNKYWSGLLHDYYGPRAAIYFKYLRESLEKHEHFKLKEWRREWIKLTNDWQSRRNIFPVVSRGDAFNTSRWLFNKYLNLTNPETPERWTEH 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03862 818 Pfam Alpha-N-acetylglucosaminidase (NAGLU) N-terminal domain 53 148 IPR024240 -
Vivi3g03862 818 Gene3D - 504 812 - -
Vivi3g03862 818 Pfam Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain 165 501 IPR024733 -
Vivi3g03862 818 Gene3D Glycosidases 160 502 - -
Vivi3g03862 818 PANTHER ALPHA-N-ACETYLGLUCOSAMINIDASE 10 804 IPR007781 -
Vivi3g03862 818 FunFam Alpha-N-acetylglucosaminidase family 160 502 - -
Vivi3g03862 818 Gene3D - 25 153 IPR029018 -
Vivi3g03862 818 Pfam Alpha-N-acetylglucosaminidase (NAGLU) C-terminal domain 510 802 IPR024732 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03862 Vivi-Chr3 66493447 66502021 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03862 K01205 - gmx:100791160 1447.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g03862 3 66493447 66502021 Vivi3g03862 3 66493447 66502021 ECH