Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03846 ATGGCTGCATTAAGAGGTGGTGGAACTGGAATCAACATCAAGGAACTGAGTCCAGAAAGAATTGAAAAATCATTTTCTGCATCCTTGAAGGCTCACAGTAAGACACCTTACCTTCTTGAAAAGAACAGTAGAAGCAACCCTAAAGAAGTTATAATAACCTTTCCAGCATCAGGTGGTTTCAAAGATTGGTATTCCAAAACTAATTTTGGTGAAATCAAAATAGATCTTACTCTATTTCCTTCACTTAGAAGTATTGGTAACAATGAACCTGCTTTGGTTAATCAATTCTTTCTCCAAAGATTCCAAGAGATTTTAGCAAAGTCTAATCTTCAAAATGAGGTGGATAGGGCAATAAAAAAGCAGAAGCAAATAATTTTTGCAGGGCATTCATCTGGTGGACCAGTGGCAATTCTGGCAACCCTTTGGGTCTTAGAAAACTACCAAAACCCAAATTTTCAGGGTGGTATCCCTCCCCTATGTGTTACATTTGGTTCTCCATTAGTTGGAAACCACATATTTTCTCATGCTACAAGAAGAGAAATATGGTCTAACTACTTTTTCCATTTTGTGCTGAGATATGACATAGTGCCAAGGATCCTCCTTGCTCCTCTGTCTTCTTTTGACCAAAAATTTGACACAGTTTCACAGCTCTTAGATCCTAAAAACAGGTCATTCATGAGCGAGTCGTCTCTCGGAAGAATCTCCTCAACTTCAGAGTTCTACTTTGAGGTGATATCAAATGCTGCAACTGTCACAAGACATGCTGCTTGCAAGCTAATGGGAACAACAGAAGCAACACTCGAAACTATTACGAATTTTGTTCCTTTGAGTCCTTATAGACCCTTTGGAACTTACATTTTCTGCACTACAAGTGGAAATGAAGCAAAGCAAATTGTCATAAAAAACCCTGATGCAATTCTGCAGGTCTTGTTTTTCTCTGCTCAGTTAAGCTCTGAAGCAGAAACTGATGAGGTTTCTCTTAAAAGCCTGCGACAACACTTCACTTATGGCGCGGAATTACCAAAAAACTTAGGAATCCAGAATGCTGTGCACTTGGACCAACTAGAGAAGATTCCTTTGTCCGAGAATACTACTACGGGCCGCGACATTGCAACCATTAACACAGCCTTAAATGATCTTGGCCTGAGCACGCGAGCAAGGTTATGCATTCAAGCAGCAGCGGCGTTAGAGGAGCGAAAAAGAAACAACGAAAAAGCCATAGAAGAGAAGACAGTATTTATGGAAGAAAAGATGAAGGAAGTGGAAAAGTACAGAGAAATGTGGGGGCATCAGAAAAAGGGTTACTACGACGGATTCAAGGATCAAGAAGATCCAGAAGATTTCAAAGCAAATGTAAAGAGACTAGATCTAGCAGGAGTATGGGACGAGATAATCGAAAAGCTTCTAAACTATGAACTTCCAGATGAATTTGAAGGGAAAATGGATTGGATTATGAGAGGAACAAACTTTAGAAGACTAGTCGAGCCTTTGGACATTGCTAATTACTATCGTCATTCGAGGAACCGTGATGGACGTGCTTATATGGATAAGGGAGGAAGGCCAAAGAGATACAGGTATACGCAGAGATGGTTGGAGCATTGTGAGAGGAGGAAAGAAGGTGGTTATTCTGAATCTTGTTTTTGGGCTGAAGTGGAGGATCTCTGTAATGACAATAAGAAATCTTTTGAAGATGTTAAGGAAAGAGTTTCGGCATTGGAGGAACAGATAGAAGAGTGGGATAAGAAAGGTGAAGTTGGTAAGGATGTGTTTTTGGAGGGTTCTACGTTTGTGAAGTGGTGGAAAACACTGCCAATACAACATAGGCAACAATCACGCATTAGAAGTCTTGTTTAA 1854 0.4013 MAALRGGGTGINIKELSPERIEKSFSASLKAHSKTPYLLEKNSRSNPKEVIITFPASGGFKDWYSKTNFGEIKIDLTLFPSLRSIGNNEPALVNQFFLQRFQEILAKSNLQNEVDRAIKKQKQIIFAGHSSGGPVAILATLWVLENYQNPNFQGGIPPLCVTFGSPLVGNHIFSHATRREIWSNYFFHFVLRYDIVPRILLAPLSSFDQKFDTVSQLLDPKNRSFMSESSLGRISSTSEFYFEVISNAATVTRHAACKLMGTTEATLETITNFVPLSPYRPFGTYIFCTTSGNEAKQIVIKNPDAILQVLFFSAQLSSEAETDEVSLKSLRQHFTYGAELPKNLGIQNAVHLDQLEKIPLSENTTTGRDIATINTALNDLGLSTRARLCIQAAAALEERKRNNEKAIEEKTVFMEEKMKEVEKYREMWGHQKKGYYDGFKDQEDPEDFKANVKRLDLAGVWDEIIEKLLNYELPDEFEGKMDWIMRGTNFRRLVEPLDIANYYRHSRNRDGRAYMDKGGRPKRYRYTQRWLEHCERRKEGGYSESCFWAEVEDLCNDNKKSFEDVKERVSALEEQIEEWDKKGEVGKDVFLEGSTFVKWWKTLPIQHRQQSRIRSLV 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03846 617 Coils Coil 555 582 - -
Vivi3g03846 617 Pfam Enhanced disease susceptibility 1 protein EP domain 419 614 IPR041266 -
Vivi3g03846 617 SUPERFAMILY alpha/beta-Hydrolases 45 203 IPR029058 -
Vivi3g03846 617 Gene3D alpha/beta hydrolase 17 251 IPR029058 -
Vivi3g03846 617 Pfam Lipase (class 3) 80 199 IPR002921 GO:0006629
Vivi3g03846 617 PANTHER PROTEIN EDS1-RELATED 15 616 IPR044214 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03846 Vivi-Chr3 66141353 66144346 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g03846 48 213 Acyl Lipid Metabolism Gene Families AT5G14930 27.711 3.30e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03846 K18875 - gmx:100819703 720.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g03846 3 66141353 66144346 Vivi3g03846 3 66141353 66144346 ECH