Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03661 ATGACATCATCCTCCACCATCCCTCATCTCCCTCCGCCGGAAGACCGCCCCGTTCGTGTCTACGCCGATGGCATCTACGATCTCTTCCATTTCGGCCACGCTCGTTCTCTTGAACAAGCCAAAAAATCGTTTCCGAACACGTACCTTCTGGTTGGATGCTGCAGCGATGCGGTAACACATAAGTATAAAGGAAAAACTGTTATGACTGAAGATGAACGTTATGAGTCTCTCCGTCACTGCAAATGGGTGGATGAAGTGATCCCGGATGCACCTTGGGTTATCAATCAGGAGTTTCTTGACAAAAACAATATTGATTTTGTAGCTCACGATTCTCTTCCATATGCTGATACAAGTGGTGCTGCAAATGATGTTTATGAATTTGTCAAGGCAGTTGGAAGATTTAAGGAAACACAACGGACTGAAGGTATATCTACATCAGATATAATAATGAGGATTGTCAAAGACTATAACCAGTATGTGTTGCGTAACTTGGATCGTGGGTACTCAAGAAAAGATCTCGGTGTGAGCTATGTTAAGGAAAAGCGATTGCGTGTGAATAGGAGACTGAAAACTTTGCAAGAGAAAGTAAAAGAACAGCAAGAAAAGATCCAAACTGTTGCGAAGAATGCTGGTATGCATAGGAATGAGTGGGTGGAAAATGCTGATCGTATGGTTGCTGGATTTCTAGAAATGTTTGAAGAAGGTTGCCATAAGATGGGAACTGCCATATGTGATCGAATTCAAGAAAGCTTAAGAGGTCAGCAATCAAATGATGATTCATTTCTTCAAAATGGCACGGATGACGAGGATGAAGAGTATTATGATGATCATGAGGAGGATAGTGAGGAAGAGTATTTTGAAGAATATTTTGATAACAATGAGCTTAATCCCCAGAATAGTGGGAAAGATAAGAACAAAACTTAG 924 0.4134 MTSSSTIPHLPPPEDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCSDAVTHKYKGKTVMTEDERYESLRHCKWVDEVIPDAPWVINQEFLDKNNIDFVAHDSLPYADTSGAANDVYEFVKAVGRFKETQRTEGISTSDIIMRIVKDYNQYVLRNLDRGYSRKDLGVSYVKEKRLRVNRRLKTLQEKVKEQQEKIQTVAKNAGMHRNEWVENADRMVAGFLEMFEEGCHKMGTAICDRIQESLRGQQSNDDSFLQNGTDDEDEEYYDDHEEDSEEEYFEEYFDNNELNPQNSGKDKNKT 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03661 307 MobiDBLite consensus disorder prediction 254 307 - -
Vivi3g03661 307 Pfam Cytidylyltransferase-like 21 150 IPR004821 GO:0003824|GO:0009058
Vivi3g03661 307 NCBIfam cytidyltransferase-like domain 19 86 IPR004821 GO:0003824|GO:0009058
Vivi3g03661 307 PANTHER CYTIDYLYLTRANSFERASE 12 284 IPR045049 GO:0004105|GO:0006657
Vivi3g03661 307 CDD CCT 16 167 IPR041723 -
Vivi3g03661 307 FunFam Choline-phosphate cytidylyltransferase 2 2 234 - -
Vivi3g03661 307 MobiDBLite consensus disorder prediction 263 290 - -
Vivi3g03661 307 Coils Coil 182 209 - -
Vivi3g03661 307 Gene3D HUPs 4 234 IPR014729 -
Vivi3g03661 307 SUPERFAMILY Nucleotidylyl transferase 19 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03661 Vivi-Chr3 62034753 62038550 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g03661 44 293 Acyl Lipid Metabolism Gene Families AT2G32260 73.705 8.25e-134 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03661 K00968 - gmx:100807840 474.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g03661 3 62034753 62038550 Vivi3g03661 3 62034753 62038550 ECH