Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03541 ATGGGTCGCGGAGCAGTGGTGGCTTTGATGCTATGCCTCTTCGGCGTCACCGTCTACGGTGAAGACCCTTATCTATACTTCACATGGAATGTTACCTACGGTACCATTTCACCTCTCGGGGTTCCCCAGCAGGGTATCCTCATCAACGGTCAGTTTCCAGGACCTGAAATCAACAGCACCAGCAACAACAACGTGGTCGTTAATGTCTTCAACAACCTTGACGAGCCACTTCTTTTCACATGGCACGGTGTTCAACAGAGGAAGAATTCATGGCAAGATGGTACCCCTGGTACTTCTTGCCCTATCCTTCCCGGAACTAACTATACATATAAGTTTCAAGTGAAGGATCAAATCGGAAGTTACTTTTACTACCCTACCACCGGCCTTCAAAGAGCCGTAGGTGGTTTCGGTGGTCTTAGAATCTTCAGTCGTTTGTTGATCCCTGTTCCTTATCTTGACCCTGAAGATGAATACTGGGTTCTCATTGGTGACTGGTTCGGAAAATCTCATAAATCTTTGAAGATGACGTTGGACAGTGGTCGTTCTATTGGAAGACCTGCCGGAGTTATCATGAACGGGAAGAACGCTAAGGGTGATGGAAGTGATGAGCCTCTTTTCACAATGAAGCCCGGAAAAACCTATAAATACAGAATCTGTAACACTGGTCTTAAGGACGCTCTTAACTTCAGATTCCAAGGACATTCAATGAAGTTGGTTGAAACTGAAGGCTCTCATGTCGTTCAAAACAGCTATGACTCTCTCGACGTTCACGTTGGACAGTGTTACACCGTCCTCGTGACCGCCGATAAAGAGCCAAAGGACTATTACATGGTTGCCTCCACTCGATTCACCAAGTATTCTTTATCCGCTAAGGGTATTGTTCGTTACACCAACGGTAAAGGTCCCGCTTCACCTGTCCTTCCACCTGCACCTGTTGGTTGGGCTTGGTCTCTTAACCAGTTCCGTTCCTTCCGTTGGAACTTAACTGCTTCTGCTGCTAGACCTAACCCTCAGGGTTCTTACCATTACGGTCAGATCAACATCACCCGCACCATCAAGCTCGTTAACTCCGTTGGCACAGTCGATGGCAAACTCAGGTACGCTATCAACGGTGTTTCCCATGTTGACACCGAAACACCTTTGAAGCTCGCTGAATACTACGGTGTTGCTGATAAGGTGTTCAAGTACGACACTATCTCCGACGTACCACCAACCAATCTCAACGCCATCACTGTTACACCTAATGTCGTCAACGCCACTTTCCGTACCTTCATCGAAGTCATCTTCGAGAACCCTGGAAAGACCGTCCAATCATACAACTTGGACGGTTACTCTTTCTTTGCTGTGGCCATTGAGCCAGGAACATGGACACCAGAGAAGAGAAAGAACTACAATCTTCTTGATGCAATCAGCAGACACACAATTCAGGTGTTCCCTAAATCATGGGCTGCAATCATGTTGACATTCGACAATGCTGGTATGTGGAATTTGAGGTCCGAGCTAGCTGAGAACCGTTACTTGGGACAACAACTCTACGTCAGTGTTCTGTCACCAGAATTCTCCAACAGGGATGAGTATAACCTTCCTGAGACCCAACAAGTTTGCGGTATCGTTAAGGATATGCCCAGGCCTGCACCAAAGTACCACTAG 1650 0.4715 MGRGAVVALMLCLFGVTVYGEDPYLYFTWNVTYGTISPLGVPQQGILINGQFPGPEINSTSNNNVVVNVFNNLDEPLLFTWHGVQQRKNSWQDGTPGTSCPILPGTNYTYKFQVKDQIGSYFYYPTTGLQRAVGGFGGLRIFSRLLIPVPYLDPEDEYWVLIGDWFGKSHKSLKMTLDSGRSIGRPAGVIMNGKNAKGDGSDEPLFTMKPGKTYKYRICNTGLKDALNFRFQGHSMKLVETEGSHVVQNSYDSLDVHVGQCYTVLVTADKEPKDYYMVASTRFTKYSLSAKGIVRYTNGKGPASPVLPPAPVGWAWSLNQFRSFRWNLTASAARPNPQGSYHYGQINITRTIKLVNSVGTVDGKLRYAINGVSHVDTETPLKLAEYYGVADKVFKYDTISDVPPTNLNAITVTPNVVNATFRTFIEVIFENPGKTVQSYNLDGYSFFAVAIEPGTWTPEKRKNYNLLDAISRHTIQVFPKSWAAIMLTFDNAGMWNLRSELAENRYLGQQLYVSVLSPEFSNRDEYNLPETQQVCGIVKDMPRPAPKYH 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03541 549 Pfam Multicopper oxidase 382 517 IPR011706 GO:0005507|GO:0016491
Vivi3g03541 549 Gene3D - 154 334 IPR008972 -
Vivi3g03541 549 SUPERFAMILY Cupredoxins 152 335 IPR008972 -
Vivi3g03541 549 Pfam Multicopper oxidase 30 143 IPR011707 GO:0005507
Vivi3g03541 549 CDD CuRO_2_AAO_like_1 156 296 IPR034271 -
Vivi3g03541 549 Gene3D - 17 142 IPR008972 -
Vivi3g03541 549 SUPERFAMILY Cupredoxins 18 170 IPR008972 -
Vivi3g03541 549 SUPERFAMILY Cupredoxins 345 530 IPR008972 -
Vivi3g03541 549 Gene3D - 344 541 IPR008972 -
Vivi3g03541 549 PANTHER MULTI-COPPER OXIDASE 43 514 IPR045087 -
Vivi3g03541 549 Pfam Multicopper oxidase 157 293 IPR001117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03541 Vivi-Chr3 59590569 59592482 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03541 K00423 - gmx:100812197 929.087