Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03500 ATGGGTTCAGTTTTAGTGTCTCCTCTTATTGTTACACTGTTACTGTTGTTACCGATAGCCATTGTTGACGGTGGAGTTCGTATTCCGACCACTCTGGATGGACCTTTCAAGCCTGTGACGGTTCCTCTTGACAAGAGCTTCCGTGGAAACGCGGTGGACTTGCCGGATACAGATCCTCTTGTTCAGAGAAATGTTGAAGGTTTTGAACCGGAACAAATCTCGCTCTCACTCTCTGCTTTTCATAACTCCGTTTGGGTTTCTTGGATCACAGGAGAGTTCCAAATTGGAGAAAACATAGAACCATTAGATCCTACAACAGTTGCTAGCATAGTTCAATACGGAAGATTCGGAAGGTCGTTGACTCGCCAAGCTGCTGGTTATTCCCTTGTGTACAGTCAGCTATATCCTTTTGAAGGACTTCAAAACTACACTTCAGGAATCATACATCATGTTCGTCTCACAGGACTCAAACCCGACACTCTATATCAATACAAATGTGGAGATCCATCTTTGTCCGCAATGAGCGACGTTCACTATTTCAGAACAATGCCAGTTTCAGGCCCCAAGAGTTACCCTAGCAGAATAGCGGTGGTTGGAGACTTAGGTCTTACGTATAATACCACGTCGACCGTCGATCATATGGCCAGCAATCATCCTGGTCTTATTCTATTGGTTGGTGATGCTAGTTATGCTAACTTGTATCTGACTAATGGTTCTAGTTCAGATTGCTACTCTTGCTCTTTTAATAATACTCCCATCCATGAAACCTATCAACCGCGTTGGGATTATTGGGGAAGGTACATGCAACCTCTGATTTCTAGTGTCCCGATAATGGTAGTAGAAGGGAATCATGAGATAGAACAACAAGCCGAGAACAAAACATTCGTTGCTTATAGTTCTCGGTTTGCATTTCCGTCAGAAGAGAGTGGATCGTCGTCCACTTTCTATTATTCTTTCAATGCTGGAGGAATACATTTTATAATGCTGGGCGCGTACATATCGTACGACAAGTCAGGGGACCAGTATAAATGGTTGGAGAAGGATTTGGCTTCTGTTGACAGGGAAGTAACTCCATGGTTGGTAGCTACATGGCATGCACCTTGGTACAGCACCTACAAGGCACATTATAGAGAAGCAGAATGTATGAGAGTCGAAATGGAAGATTTATTATATAAATACGGTGTTGACGTTGTCTTCAATGGACATGTTCATGCATATGAGAGATCAAATCGAGTATATAACTACACATTGGATCCCTGCGGTCCTGTTCATATCACGGTTGGAGACGGTGGTAACCGGGAAAAGATGGCGATTACTCACGCGGATGAACCAGGAAACTGTCCAGAACCATCAACTACACCAGATGAGTACATGGGCGGCTTCTGCGCCTTTAATTTTACGTCCGGCCCTGCAGCAGGTACGTTCTGTTGGGACCGACAGCCTGATTATAGCGCTTTCCGCGAAAGCAGCTTCGGTCATGGGATTCTAGAGATGAAGAATGAAACTCATGCATTATGGATTTGGCACCGCAATCAAGACTTTTATGGCAGTGCTGGTGATGAGATTTACATTGTTAGGCAGCCTGAGAAGTGTCCACCAGTCAAGACACAGGAGATACATAAAACATGA 1629 0.4432 MGSVLVSPLIVTLLLLLPIAIVDGGVRIPTTLDGPFKPVTVPLDKSFRGNAVDLPDTDPLVQRNVEGFEPEQISLSLSAFHNSVWVSWITGEFQIGENIEPLDPTTVASIVQYGRFGRSLTRQAAGYSLVYSQLYPFEGLQNYTSGIIHHVRLTGLKPDTLYQYKCGDPSLSAMSDVHYFRTMPVSGPKSYPSRIAVVGDLGLTYNTTSTVDHMASNHPGLILLVGDASYANLYLTNGSSSDCYSCSFNNTPIHETYQPRWDYWGRYMQPLISSVPIMVVEGNHEIEQQAENKTFVAYSSRFAFPSEESGSSSTFYYSFNAGGIHFIMLGAYISYDKSGDQYKWLEKDLASVDREVTPWLVATWHAPWYSTYKAHYREAECMRVEMEDLLYKYGVDVVFNGHVHAYERSNRVYNYTLDPCGPVHITVGDGGNREKMAITHADEPGNCPEPSTTPDEYMGGFCAFNFTSGPAAGTFCWDRQPDYSAFRESSFGHGILEMKNETHALWIWHRNQDFYGSAGDEIYIVRQPEKCPPVKTQEIHKT 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03500 542 Gene3D - 189 534 IPR029052 -
Vivi3g03500 542 FunFam Purple acid phosphatase 189 451 - -
Vivi3g03500 542 PANTHER ACID PHOSPHATASE RELATED 15 530 IPR039331 GO:0003993
Vivi3g03500 542 SUPERFAMILY Metallo-dependent phosphatases 194 515 IPR029052 -
Vivi3g03500 542 SUPERFAMILY Purple acid phosphatase, N-terminal domain 48 184 IPR008963 GO:0003993|GO:0046872
Vivi3g03500 542 CDD MPP_PAPs 189 526 IPR041792 -
Vivi3g03500 542 Pfam Calcineurin-like phosphoesterase 194 406 IPR004843 GO:0016787
Vivi3g03500 542 Pfam Purple acid Phosphatase, N-terminal domain 70 182 IPR015914 GO:0003993|GO:0046872
Vivi3g03500 542 Pfam Iron/zinc purple acid phosphatase-like protein C 421 513 IPR025733 -
Vivi3g03500 542 Gene3D - 69 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03500 Vivi-Chr3 58694715 58711784 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g03500 70 431 Miscellaneous Gene Families AT1G13900 26.265 4.40e-23 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03500 K22390 - gmx:100784006 1016.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g03500 3 58694715 58711784 Vivi3g03500 3 58694715 58711784 ECH