Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03472 ATGGCCTCTCCACCAGACACAAGCAAAACCGTAAAGCTAGAACGCTACAATAGCTACATCAGAAAAGTTAACAGCACAAAACTCCTTAACGCTTCCTCCAAACTTCTCTTCCGTGCCACACTCTTAATCGCACTCGTCCTCGTTTTCTTCTTCACTTTCAACTACCCTCCACTCTCCGACTCCACCAACCACCACTTCCACACCCATTCCCACTTCCTCACCTCCGCATTCGGCGGAGGTGGCGGTGCTTGGGAGCGACAAATCCGTCACTCCGCTACACCCCGTCGCCCCAACGGTTTCACTGTACTTGTAACCGGTGCAGCCGGTTTCGTCGGTTCACACTCTTCCCTCGCTCTTAAAAAACGAGGCGACGGTGTTATAGGTCTAGATAACTTCAACACCTATTACGACCCGTCGTTGAAGCGAGCAAGACAAGCTCTACTAACTCAGCATCAAATCTTCATCGTCGAAGGCGACCTAAACGACGCGCCGTTGTTAACGAAACTCTTTGACGTAGTTCCGATCACTCACATCCTTCACCTCGCAGCACAAGCCGGAGTTCGTTACGCCATGCAAAATCCACAATCTTATATCAAATCCAACATTGCCGGCTTCGTTAACCTTCTCGAAGTTGCAAAAGCTGCTAATCCTCAACCGGCGATCGTTTGGGCTTCATCAAGCTCAGTCTACGGTCTCAACACTGAGAATCCATTCTCAGAGCTTCACCGGACAGATCAACCGGCGAGTCTCTACGCCGCAACTAAAAAAGCCGGCGAGGAAATTGCTCATACTTACAATCACATCTACGGTCTCTCCCTCACCGGACTCCGTTTCTTCACCGTCTACGGTCCTTGGGGAAGACCAGACATGGCGTACTTCTTCTTCACCAAAGATATTCTCCACGGAAAAACCATCGATGTGTACCAAACGCAAGAAGGAAAAGAAGTCGCGCGTGACTTCACGTACATCGATGATATCGTGAAAGGTTGCATAGGAGCTTTGGACACAGCGGAGAAGAGCACCGGAAGCGGAGGGAAGAAGAAAGCACCGGCGCAATTACGAATCTACAATCTCGGAAACACGTCGCCGGTGCCGGTGGGGAAACTCGTATCGATTCTGGAAAACTTGCTGACCACGAAGGCGAAGAAGCACATCCTCAAGATGCCACGAAACGGCGACGTTCCGTACACGCACGCGAATGTGACATTGGCTTACAGAGATTTCGGGTACAAACCAACAACGGATCTTTCAACGGGGTTGAGAAAATTCGTCAAGTGGTACGTTCGTTATTACGGGATTCAGTCAGGGCTAAAAAAGGAAAATCATCTCAATAACGAACAACCCGAGGATTCCGCTTGA 1359 0.4989 MASPPDTSKTVKLERYNSYIRKVNSTKLLNASSKLLFRATLLIALVLVFFFTFNYPPLSDSTNHHFHTHSHFLTSAFGGGGGAWERQIRHSATPRRPNGFTVLVTGAAGFVGSHSSLALKKRGDGVIGLDNFNTYYDPSLKRARQALLTQHQIFIVEGDLNDAPLLTKLFDVVPITHILHLAAQAGVRYAMQNPQSYIKSNIAGFVNLLEVAKAANPQPAIVWASSSSVYGLNTENPFSELHRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTKDILHGKTIDVYQTQEGKEVARDFTYIDDIVKGCIGALDTAEKSTGSGGKKKAPAQLRIYNLGNTSPVPVGKLVSILENLLTTKAKKHILKMPRNGDVPYTHANVTLAYRDFGYKPTTDLSTGLRKFVKWYVRYYGIQSGLKKENHLNNEQPEDSA 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03472 452 FunFam UDP-glucuronate 4-epimerase 3 101 432 - -
Vivi3g03472 452 PRINTS Nucleotide sugar epimerase signature 393 410 - -
Vivi3g03472 452 PRINTS Nucleotide sugar epimerase signature 318 333 - -
Vivi3g03472 452 PRINTS Nucleotide sugar epimerase signature 353 368 - -
Vivi3g03472 452 PRINTS Nucleotide sugar epimerase signature 128 144 - -
Vivi3g03472 452 Gene3D - 103 414 - -
Vivi3g03472 452 PANTHER EPIMERASE-RELATED 84 434 - -
Vivi3g03472 452 Gene3D - 279 427 - -
Vivi3g03472 452 Pfam NAD dependent epimerase/dehydratase family 102 339 IPR001509 -
Vivi3g03472 452 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 95 433 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03472 Vivi-Chr3 58282058 58284142 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g03472 1 452 Miscellaneous Gene Families AT3G23820 79.221 0.0 740
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03472 K08679 - qsa:O6P43_002605 807.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g03472 3 58282058 58284142 Vivi3g03472 3 58282058 58284142 ECH