Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03456 ATGACAGTCTCTCAAGAAGACATTGCTTATGAGATATTTTCTTGGTTACCTGCAAAAATCATTTGTAAATTTAAATTAACTTGCACTTCATTCTCCAAATTTTCAGAAGAATCTCCTTTCAAAACAAAACAATCTTGTAATTTGTTAGGAATGAGTGATACATGTTTCTTCCTCCAACATGATCAAATAAGTCAAAGATATCAAAAAAGGATTGAGTTGCACCATTTACCTAAAGAGCAACAATTGTCTGGTGTTCCTAACAATATTCTCACGTTCCTATCAAGCTCAGCTTGTATTCTAGCATCTAGTAATGGTTTGCTTCTTTGTCATACCATTAATGAAGATCCAATTGAATTGTTTATTTGCAATCCAATTACAAAGTCTCGCTTTTTCATTCCTTCTCCTGAGTCATTTACAAAAAGCCATAACTTTTCTACTATAAATGTCATGTTGGATTGTTCTAACAGCTCTTCTTCTGATGACTATTTCATACTTCTTTTAGAAAACACAGAAGAATGGTCACCAACTAGTTATGCATGCAATATATATCATGGAAAACAAGGCGTGTGGAAATCAATGGAAAACGACTTTTTAAGTGGCGGTAGGAATATGAAATTTGACATGCCGGTGTTTTACAATGGAGCCGTTCACTTCATCTCAGATTGCTCGGATTACTTTATGAGATCAAGTCCTTTTTATAAGCCTTACATAGTGTCTTATAATTTTGAAAAAGGAACTTCAACTATTCTTAAATTGCCAAGGGAAGCTATAAAAGGTTTTCACATCGAGTGTGACATGGGCATATTTAATTGGGGTAAAGTGACAAGTTTCTATAGTTCTATTTGTTTAGTGAAATTAAGAAAGTCTGTTTTTTCCATTTGGATTTTAAAAGATTACAAGTCATGTTCATGGAAAAAGATTTTGAAGGTGAGAGTGAATGCATTGGGGTTAGAAGAGAAAGAAGCTCATGTCACCGGATTTACAGTCATGAATGGCAATATTTTAGTTTTTTCTACAGAACAGAAAATATATAGTTGTGGTTTGGATGGAGAAACATTTATGATTGTGAAAGAAATAGGCTCACACAACTGTGGATCCAATCCTAGCTTTATTTCCTACTCAAACACTCTTCGTTCTTGTGGGACTAATGTTAAAACCATGCCTTGCTAG 1170 0.3385 MTVSQEDIAYEIFSWLPAKIICKFKLTCTSFSKFSEESPFKTKQSCNLLGMSDTCFFLQHDQISQRYQKRIELHHLPKEQQLSGVPNNILTFLSSSACILASSNGLLLCHTINEDPIELFICNPITKSRFFIPSPESFTKSHNFSTINVMLDCSNSSSSDDYFILLLENTEEWSPTSYACNIYHGKQGVWKSMENDFLSGGRNMKFDMPVFYNGAVHFISDCSDYFMRSSPFYKPYIVSYNFEKGTSTILKLPREAIKGFHIECDMGIFNWGKVTSFYSSICLVKLRKSVFSIWILKDYKSCSWKKILKVRVNALGLEEKEAHVTGFTVMNGNILVFSTEQKIYSCGLDGETFMIVKEIGSHNCGSNPSFISYSNTLRSCGTNVKTMPC 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03456 389 NCBIfam F-box protein interaction domain 104 344 IPR017451 -
Vivi3g03456 389 SUPERFAMILY F-box domain 7 73 IPR036047 GO:0005515
Vivi3g03456 389 PANTHER F-BOX PROTEIN INTERACTION DOMAIN PROTEIN-RELATED 6 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03456 Vivi-Chr3 57926287 57927456 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03456 - - psat:127079868 644.425