Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03422 ATGATGGCTGTGAATATTGCAATCCTTATAACCAGCTTGCTCTGTATCCTCTCAGCGGCGTCGTGTGGGCGGGTGATAGTTGGGGCAAAGACGGAGATTACTGACGTGAGGTCAAACAAGGAGGTGCAGGAGCTTGGGAGGTTTGCTGTAGAGGAGTACAACTACAAACAAAGCAACGGCGGCGGAGAGATGTTGAAGTTTGTGGAGGTGGTGGAGGCGGAGAAGCAAGTGGTGTCAGGGATGAAGTATTATCTTAATATTTCAGCCGTTGATCGTAATGGTGTTCATAGAATGTTCACTTCTGTTGTGGTGGTCAAGCCGTGGCTTCAGTATAAAAAGGTTGTCCATTTTGGGGATTCATCTACCTTCCACCAACTACAACGTACAAGTATGTAA 396 0.4697 MMAVNIAILITSLLCILSAASCGRVIVGAKTEITDVRSNKEVQELGRFAVEEYNYKQSNGGGEMLKFVEVVEAEKQVVSGMKYYLNISAVDRNGVHRMFTSVVVVKPWLQYKKVVHFGDSSTFHQLQRTSM 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03422 131 SUPERFAMILY Cystatin/monellin 32 118 IPR046350 -
Vivi3g03422 131 SMART CY_4 25 120 IPR000010 GO:0004869
Vivi3g03422 131 CDD CY 39 117 IPR000010 GO:0004869
Vivi3g03422 131 ProSitePatterns Cysteine proteases inhibitors signature. 75 88 IPR018073 -
Vivi3g03422 131 Pfam Aspartic acid proteinase inhibitor 38 117 IPR000010 GO:0004869
Vivi3g03422 131 Gene3D - 17 120 - -
Vivi3g03422 131 PANTHER CYSTEINE PROTEINASE INHIBITOR 2 3 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03422 Vivi-Chr3 57399049 57399751 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03422 K13899 - gmx:100527919 140.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g03422 3 57399049 57399751 Vivi3g03422 3 57399049 57399751 ECH