Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03417 ATGGCTCTGTGTGGCTCTTCTATATCTTCACCAAACTTGAATTCGAAAATTGGGACAAGAAACATATCAAAATCGACTTCTTTTTCTATGAATTCAGATACCACAATTTCGTTATCGTTTTCCGGAAGTGTATCCATGGGTCTTAACCTGAGGTTGAATCTCGCTTCTTCAACTTGTAGTGTCAAGAGAAACAGGTTTAGGAACCATGGCTCTCGTTTGAAAGTAGTTTGTATTGATTATCCACGGCCTGAGCTTGAAAATACCGTTAATTTTATTGAAGCTGCTTACTTGTCTTCCACCTTTCGTGCTTCTCCGCGTCCAACTAAACCCTTGAAGGTTGTTATTGCTGGTGCAGGACTGGCTGGTTTATCAACTGCAAAATATTTGGCAGATGCTGGTCACAAGCCTATATTGCTGGAGGCAAGAGACGTTCTAGGTGGAAAGGTTGCTGCATGGAAAGATAAAGATGGGGACTGGTATGAGACTGGCTTACATATATTTTTTGGGGCTTACCCTAATGTGCAGAACTTATTTGGAGAACTCGGTATTAACGATCGGTTACAATGGAAGGAGCACGCTATGATCTTTGCTATGCCAAGCAAGCCTGGACAGTTTAGTCGATTTGATTTTCTCGAAGTCCTTCCATCTCCATTAAATGGAATATGGGCAATCTTGAGGAATAACGAGATGCTGACCTGGCCAGAGAAAATCAAATTTGCAATTGGACTTCTGCCAGCTATTCTTGGTGGACAGCCATATGTTGAGGCTCAAGATGGTCTTTCTGTTAAAGAATGGATGAAAAAGCAGGGCATTCCTGAACGGGTAACTGATGAAGTGTTCATAGCAATGTCAAAGGCTCTAAACTTCATCAACCCTGATGAACTTTCAATGCAATGTATTTTGATTGCATTAAACCGGTTTCTTCAGGAGAAGCATGGTTCTAAGATGGCCTTTTTGGATGGCAATCCCCCGGAAAGACTTTGTATGCCAATTGTTGATCATATTCAGTCATTGGGCGGTGAAGTCCATCTTAACTCACGCATTAAATCAATTGAGCTAAACGATGACAATACGGTGAAGAGCTTTTTACTAACTAATGGGAAAGTGATTGAAGGGGATGCTTATGTGTCTGCAGCACCAGTGGATATTCTGAAGCTTCTTCTACCTGAGAACTGGAAAGGGGTTCCTTATTTCCAGAGATTGGAGAAATTGGTTGGAGTTCCAGTCATAAATGTTCACATATGGTTTGACAGAAAACTGAAGAACACATATGATCACCTTCTCTTTAGCAGAAGTCCACTTCTGAGTGTATATGCTGACATGTCGGTAACTTGTAAGGAATATTATAACCCAAACCAGTCTATGTTGGAGCTGGTTTTCGCACCAGCTGAAGAATGGATTTCACGCAGTGATGAAGATATTATTGATGCCACAATGTCTGAACTTGCCAAACTCTTCCCTGATGAAATTTCTGCAGATCAAAGCAAAGCAAAAATCATCAAGTACCACGTTGTTAAAACACCAAGGTCTGTTTACAAAACTGTTCCAAATTGCGAGCCTTGTCGTCCGATACAAAGATCTCCTATAGAAGGTTTCTATTTATCAGGAGATTACACAAAACAAAAATATTTAGCTTCCATGGAAGGTGCTGTTCTTTCTGGGAAGCTGTGTGCACAGGCTATTGTACAGGATTCGGAGCTACTTACTGCTAGGGGGCAGAAAAGAATAGCTCAAGCAAGTAGTGTTTAA 1749 0.4105 MALCGSSISSPNLNSKIGTRNISKSTSFSMNSDTTISLSFSGSVSMGLNLRLNLASSTCSVKRNRFRNHGSRLKVVCIDYPRPELENTVNFIEAAYLSSTFRASPRPTKPLKVVIAGAGLAGLSTAKYLADAGHKPILLEARDVLGGKVAAWKDKDGDWYETGLHIFFGAYPNVQNLFGELGINDRLQWKEHAMIFAMPSKPGQFSRFDFLEVLPSPLNGIWAILRNNEMLTWPEKIKFAIGLLPAILGGQPYVEAQDGLSVKEWMKKQGIPERVTDEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHIQSLGGEVHLNSRIKSIELNDDNTVKSFLLTNGKVIEGDAYVSAAPVDILKLLLPENWKGVPYFQRLEKLVGVPVINVHIWFDRKLKNTYDHLLFSRSPLLSVYADMSVTCKEYYNPNQSMLELVFAPAEEWISRSDEDIIDATMSELAKLFPDEISADQSKAKIIKYHVVKTPRSVYKTVPNCEPCRPIQRSPIEGFYLSGDYTKQKYLASMEGAVLSGKLCAQAIVQDSELLTARGQKRIAQASSV 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03417 582 PANTHER PROTOPORPHYRINOGEN OXIDASE 101 573 - -
Vivi3g03417 582 NCBIfam 15-cis-phytoene desaturase 112 562 IPR014102 GO:0016117|GO:0016166
Vivi3g03417 582 Pfam Flavin containing amine oxidoreductase 120 561 IPR002937 GO:0016491
Vivi3g03417 582 Gene3D - 108 571 IPR036188 -
Vivi3g03417 582 FunFam 15-cis-phytoene desaturase, chloroplastic/chromoplastic 108 570 - -
Vivi3g03417 582 SUPERFAMILY FAD/NAD(P)-binding domain 108 563 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03417 Vivi-Chr3 57337333 57343161 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03417 K02293 - gmx:547970 1020.76