Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03416 ATGGGCTTTCTTCCATTCCCACTCATGAGCCCAGCCTATTCATGTCAAGAACCAGATAAACCTATTCAAGATATTGCGAAAGAAAAAGTCGGTTCCATCTTATCAGTAAAGGTAATTAAAGTAGATGAGGAGTCAAAGAGATTGATATTATCTGAAAAGGATGCTACCTGGTCTAAACATTCAAAATATGTCAACATAGGGGATATTTTTGAAGCAAGAATTGGTTGTGTTGCGGAATATGGTGCTTTTGCTTATCTGCGCTTCCCTGACGGTCTTTATCACCTTTCCGGGTTAATACATATCTCAGAAGTGTCATGGGATCTAATTCAAGATGTAAGAGATTTCTTAAGAGAAGGCGACGACGTGAGGGTCAAAGTTGTTAGTATTGATAGTGTAAAATCGAGGCTTGGACTTTCAATTAAACAGCTAGAAGAAGATCCACTTCTAGAAACTCTGGACAAAGTAATACCTCAGGATGGTTTAGCTGTTTCTGGTTCTTTCAGCCGTAGTAATGGCAGTCACATTGATCCCCTACCAGGGCTTGATACAATTCTTGAGGAGCTACTGCAGGAAGATGGCATATCCGATGCAAGAATCAGCCGTCAGGGGTTTGAAAAACGAGTGGTCTCACAAGACTTGCAGCTTTGGCTTTCTAATGCACCTCCCTTGGACCAGAGGTTTACTCTCCTTGCTCGAGCTGGAAGACAGGTGCAGGAGATACTTCTGAAAACATCACTTGATCAGGGCGGCATAAAAAAGGCAATACAACGAGTATTGGAGCGTGTTCCCTGA 792 0.423 MGFLPFPLMSPAYSCQEPDKPIQDIAKEKVGSILSVKVIKVDEESKRLILSEKDATWSKHSKYVNIGDIFEARIGCVAEYGAFAYLRFPDGLYHLSGLIHISEVSWDLIQDVRDFLREGDDVRVKVVSIDSVKSRLGLSIKQLEEDPLLETLDKVIPQDGLAVSGSFSRSNGSHIDPLPGLDTILEELLQEDGISDARISRQGFEKRVVSQDLQLWLSNAPPLDQRFTLLARAGRQVQEILLKTSLDQGGIKKAIQRVLERVP 263
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03416 263 Gene3D - 57 143 IPR012340 -
Vivi3g03416 263 Pfam S1 RNA binding domain 64 141 IPR003029 GO:0003676
Vivi3g03416 263 SUPERFAMILY Nucleic acid-binding proteins 25 74 IPR012340 -
Vivi3g03416 263 ProSiteProfiles S1 domain profile. 1 53 IPR003029 GO:0003676
Vivi3g03416 263 PANTHER OS03G0844900 PROTEIN 1 263 - -
Vivi3g03416 263 SMART S1_6 65 141 IPR022967 -
Vivi3g03416 263 ProSiteProfiles S1 domain profile. 67 141 IPR003029 GO:0003676
Vivi3g03416 263 SUPERFAMILY Nucleic acid-binding proteins 65 154 IPR012340 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vivi3g03416 Vivi-Chr3 57328331 57333186 Tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03416 - - qsa:O6P43_023612 394.045