Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03410 ATGGCCACTTCTATTATGCTATCCACCTCTTTCTCTTCCACACATCACCCATCCCTTTTCCGTCCCTCTTCTTCCCTTCCATTCTCCAAACCAAAACTCCTTTCACATTCCTCCTCCAATCCCCCATGTTGGAACACAAAACCACTCTCTTTGCATCACACCTTCAACTTCACCTCCCTCGCTCGCTCTCTAACAAAGGACCAAGAAAACTCAACCCTCGTCGGCGAGGATTCCGCGGTATTCGATTTAACCAAACAGAAAATATCCTCCTGGATTTATTTCACCGCAGTTTTAGGAGTTGTTCTCTTCGTTCTAAACGTAGCTTGGATCGATAATTCAACTGGCCTCAGCAAAGCTTTCGTCGATGCTGTTTCAAGTCTTTCCGATTCTCACGAGGTGGTAATGTTGATCCTATTTCTCATATTCGCTGTTTTCCACAGCGGCATGGCTAGCCTCCGCGACGCCGGCGAGAAACTCATCGGAGAAAGAGCTTTTCGTGTTATTTTTGCCGGGATATCACTACCTTTGGCTGTCACTACTGTTGTGTATTTTATTAATCATAGATATGATGGAGTTCAACTCTGGCAGCTCCAGAGTATTCCTGGGATTCATTCATTTCTGTGGCTTTCAAATTTCATATCTTTCTTTTTCTTATATCCTTCAACCTTTAATCTCTTAGAGGTTGCAGCAGTTGACAAACCTAAAGTACATCTATGGGAAACTGGCATCATAAGAATAACTAGGCATCCACAGTTGGTTGGGCAGGTAATCTGGTGTCTTGCTCATACGGTTTGGATTGGAAATTCAGTGGCTGTTGCAGCTTCAATTGGTTTAATTTCACATCATCTATTTGGTGCTTGGAATGGAGACAGACGATTGGCTATAAGATTCGGAGAAGATTTTGAGAAAGTTAAGCGCCGAACAAGTATTGTCCCATTTGCAGCAATCCTTGATGGCCGTCAAAGATTACCCAAAGATTTCTACAAGGAGTTTATTCGATTGCCATACTTAGCAATTACTGCAGTAACACTAGGAGCTTACTTTGCACATCCCCTTATGCAGACTGCTAGCTACAACCTCCATTGGTAG 1089 0.4325 MATSIMLSTSFSSTHHPSLFRPSSSLPFSKPKLLSHSSSNPPCWNTKPLSLHHTFNFTSLARSLTKDQENSTLVGEDSAVFDLTKQKISSWIYFTAVLGVVLFVLNVAWIDNSTGLSKAFVDAVSSLSDSHEVVMLILFLIFAVFHSGMASLRDAGEKLIGERAFRVIFAGISLPLAVTTVVYFINHRYDGVQLWQLQSIPGIHSFLWLSNFISFFFLYPSTFNLLEVAAVDKPKVHLWETGIIRITRHPQLVGQVIWCLAHTVWIGNSVAVAASIGLISHHLFGAWNGDRRLAIRFGEDFEKVKRRTSIVPFAAILDGRQRLPKDFYKEFIRLPYLAITAVTLGAYFAHPLMQTASYNLHW 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03410 362 Pfam NnrU protein 134 353 IPR009915 -
Vivi3g03410 362 Gene3D - 127 313 - -
Vivi3g03410 362 PANTHER 15-CIS-ZETA-CAROTENE ISOMERASE, CHLOROPLASTIC 44 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03410 Vivi-Chr3 57287710 57290493 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03410 K15744 - gmx:100793910 525.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g03410 3 57287710 57290493 Vivi3g03410 3 57287710 57290493 ECH