Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03381 ATGTACGGATCGGAGAACAACCGTGAAGATTCGGAGCGAACGGCTTTCCGACGAACGGAGAAGAAGTACAAGCTCTACTATGATAACAATGCTTCATCCAAGAACAAAAAGAATAAACAACCGAAACCGGTGGACTTAACGGAGGTACTTGACTTCAGATCAATTCTAGAATGCCATAACCGCAACGCTGAGCTTCCTCAAGGTGTTGTTGTTCTTCAGGACAAATTCAGTTCTCCAGTGTTCTCTTTGCAAAATCACCCTGGCTTTTATTTTATACCTGGGGCATTGAGCATAGAGAAACAATGTGATTTGATAAGGGAGAGTTTAACTGAATTTCCGCAGCCACCTAACAGAACAAATCACAATGCCATATATGGTCCTATACACGATTTGTTTGTTGCGGCCAAAGAAGGGAAAGTTTTGGTTGAAGAGAAATCTCCAGTTACTTCGCATGAATGTAGTTCTGATTTGGATTGTAGGGATGGTGAGGAATGGAAGTTTTTCACGGAAAAGGAAGCGTCCTTAAGAAAAAGCAGATCAGTTTCTGGTTCTTCTTTGCTGCGAAAGTTGCGATGGAGTACCCTTGGACTACAGTTTGATTGGTCCAATCGAAATTATAATGTGTCTCTCAAACATAACAAAATCCCTGAAGCACTATGTGAGCTCGCCAAACAATTAGCAAAACCTGCATTACCTGCTGGAGTTGAATTCCAGCCTGAAGCTGCGATAGTAAATTACTTTGCATCAGGGGACACACTGGGTGGCCACCTTGATGATATGGAAGCAGATTGGAGTAAGCCCATAGTTAGTTTAAGCTTGGGCTGTAAAGCCATTTTTCTATTGGGAGGAAAATCTAGAGAGGATGCTCCCCTAGCGATGTTTCTTCGAAGTGGGGATGTTGTACTCATGGCTGGAGAAGCAAGGGAATGCTTTCATGGTGTTCCTCGGATCTTCGCCGACAAAGAAAATGCTGAGATAGGCCATCTTGAGGCACAGTTGGCGCACGAAGATGATCTTTGTTTCCTAAACTATATTCAAACTTCAAGAATCAACATCAATATCAGACAAGTGTTTTAA 1077 0.4253 MYGSENNREDSERTAFRRTEKKYKLYYDNNASSKNKKNKQPKPVDLTEVLDFRSILECHNRNAELPQGVVVLQDKFSSPVFSLQNHPGFYFIPGALSIEKQCDLIRESLTEFPQPPNRTNHNAIYGPIHDLFVAAKEGKVLVEEKSPVTSHECSSDLDCRDGEEWKFFTEKEASLRKSRSVSGSSLLRKLRWSTLGLQFDWSNRNYNVSLKHNKIPEALCELAKQLAKPALPAGVEFQPEAAIVNYFASGDTLGGHLDDMEADWSKPIVSLSLGCKAIFLLGGKSREDAPLAMFLRSGDVVLMAGEARECFHGVPRIFADKENAEIGHLEAQLAHEDDLCFLNYIQTSRININIRQVF 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03381 358 SUPERFAMILY Clavaminate synthase-like 87 357 - -
Vivi3g03381 358 FunFam Alpha-ketoglutarate-dependent dioxygenase alkB 148 357 - -
Vivi3g03381 358 Pfam 2OG-Fe(II) oxygenase superfamily 163 355 IPR027450 -
Vivi3g03381 358 Gene3D - 150 357 IPR037151 -
Vivi3g03381 358 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 238 358 IPR005123 -
Vivi3g03381 358 PANTHER ALKYLATED DNA REPAIR PROTEIN ALKB-RELATED 5 357 IPR004574 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03381 Vivi-Chr3 56853263 56858641 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03381 K10765 - gmx:100797068 592.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g03381 3 56853263 56858641 Vivi3g03381 3 56853263 56858641 ECH