Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03373 ATGCAAACCAAGAAAAAAGCCTCCAGGCGAAATGCTACCCGAGAGTGCGTTTCTCCTAGGGCTTCAAGAGCACAGAAGAAGGTCTCTGAAAATGGCCAGGTGGTTGAAAAGAAAGTGGCAGATTTAATTACATCTTCTGCAAGAAAGATTAAACCTGCTTGCGCTATTGAGAATAAAGCTGTAGAACCAATGCCCATAACTCTTTTGGATAACAAGAACGGCACTGAAGCAGTTGACGGTGTTTCAGTAGATTTTGAGGGTTGTAACGAGCAAGCTCTACCTCTGGAGACTGGAACTATATTTTCTCCTGGGTTTCACTTATCTAAAGGTTCTGGAGGAAAGGTTGCTGACAGAGTTGATTTTGTCCAAATATTTCGGTGTGAGGATCAAAAAAGAATATCTCTCGACCAAGAAGTAACACAGTTACCACAGGAGGATGCAGGAGATGACCATGTTAGTCAAGATTTTGACTCTGCCATGGAAGTAGACATAAACAATTCGTCAAATGTGCTTGCTATAAGCACAAAAACTGTCAATGGTAGCAGTTCTGATTTTGATGGAAATGGTCTTTCCGTGGAAGTTCCTTCCATATATCTTGCCATGAAAAACTCAAAGCTGGAATGTATTGATGAGCATGGTCAGGACTCTGTATCATCTGATATGTGCCCAGAAGATGATGAATTTGAGGATTATGACGATTTTGACCCTTACCTATTCATAAAGACTTTACCTGACTTATCAAGGGTTGTTCCCACTTTTAGACGGATGTTGCTACCTAAGCAGACTCGGAGCTGCCCTCCTATTACTCTTGTTCTGGACTTGGATGAAACTTTGGTGCATTCTACCCTAGAACCTTGCGAAGATATAGATTTTACTTTCACTGTGAATTTTAACTGTGAGGAGCACAATGTCTATGTGCGCTGCCGTCCTCACCTAAAAGATTTCCTTGAGAGAGTTTCTGGTCTTTTTGAAATTATTATATTTACAGCCAGTCAAAGTATTTATGCTGAGCAACTCCTAAATGTGCTTGATCCAAAGCGGAAGATATTTCGCCATCGTGTATTCCGTGAATCCTGTGTTTATGTGGAGGGGAATTACCTCAAAGATTTAACAGTGCTTGGTCGTGATTTAGCACATGTTATAATAATCGACAACTCCCCACAGGCATTTGGGTTCCAAGTGGACAATGGAATACCGATTGAGAGTTGGTTTGATGATCCTTCAGATAGAGAATTGCTTGTATTGCTTCCTTTCTTGGAGAGTTTGGTAGGAGTTGATGATGTCCGACCCCAAATTGCAAAAAAGTTCAAGCTCCGGGAGAAAATTGCTGCAGCTGTGCATCCTTTAAATACTAGTAGAAGAGTTTTCTTGTCTGAATAA 1380 0.4101 MQTKKKASRRNATRECVSPRASRAQKKVSENGQVVEKKVADLITSSARKIKPACAIENKAVEPMPITLLDNKNGTEAVDGVSVDFEGCNEQALPLETGTIFSPGFHLSKGSGGKVADRVDFVQIFRCEDQKRISLDQEVTQLPQEDAGDDHVSQDFDSAMEVDINNSSNVLAISTKTVNGSSSDFDGNGLSVEVPSIYLAMKNSKLECIDEHGQDSVSSDMCPEDDEFEDYDDFDPYLFIKTLPDLSRVVPTFRRMLLPKQTRSCPPITLVLDLDETLVHSTLEPCEDIDFTFTVNFNCEEHNVYVRCRPHLKDFLERVSGLFEIIIFTASQSIYAEQLLNVLDPKRKIFRHRVFRESCVYVEGNYLKDLTVLGRDLAHVIIIDNSPQAFGFQVDNGIPIESWFDDPSDRELLVLLPFLESLVGVDDVRPQIAKKFKLREKIAAAVHPLNTSRRVFLSE 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03373 459 SMART forpap2 266 410 IPR004274 -
Vivi3g03373 459 CDD HAD_FCP1-like 267 400 - -
Vivi3g03373 459 PANTHER DULLARD PROTEIN PHOSPHATASE 150 437 - -
Vivi3g03373 459 NCBIfam dullard-like phosphatase domain 269 431 IPR011948 GO:0016791
Vivi3g03373 459 ProSiteProfiles FCP1 homology domain profile. 263 422 IPR004274 -
Vivi3g03373 459 Pfam NLI interacting factor-like phosphatase 269 429 IPR004274 -
Vivi3g03373 459 Gene3D - 253 437 IPR023214 -
Vivi3g03373 459 SUPERFAMILY HAD-like 257 433 IPR036412 -
Vivi3g03373 459 MobiDBLite consensus disorder prediction 1 30 - -
Vivi3g03373 459 FunFam CTD small phosphatase-like protein 2 256 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03373 Vivi-Chr3 56743173 56747945 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03373 K17616 - gmx:100798665 691.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g03373 3 56743173 56747945 Vivi3g03373 3 56743173 56747945 ECH