Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03328 ATGTGGTCAGTTCTACGAGCTCGGGTCTGTTCCTCGCGTTACGCATCAAATCCACAGCCCCTTCTTCAACCATGGAAGCTAGGTTTTTCCTCTCTATCCACTACCGTTGAAATTGACAGTGGTGTTAGTAAACGCTTCCTAGATCTGCAAGAGATCGAGAAGATTCTGACGGACGTTCAAGCCGACAACGTGAAGATAATTCCAGTTCCCAAACACAGCGAGTGGGCGGATTTCATGGTTCTCGCCACTGGTAAATCGCCATGGCACGTCAGGAATATCGCTCAAGCCCTAATTTATAAGGCTAAGCAGAAGCAGATAGGTGCTCAGCAAATGATGCTGCCTAGTGTGCAAGGGCAAGAGGATGGAAAATGGATTGTTATTGACTCTGGTAAAGTGATAGTTCACGCACTTGATGAAAATGCTAGAGCTTACTACAATTTGGAGGGTCTTTGGACCCGTGGGACATTGCAAAATGAACCTGTTGAGGATTTACAAAAAGTTTTGGTGAAGGTCCGACGGAAAAACAATTCCAAGAAACCTGCTCAAAAGAATGTGTAA 558 0.4534 MWSVLRARVCSSRYASNPQPLLQPWKLGFSSLSTTVEIDSGVSKRFLDLQEIEKILTDVQADNVKIIPVPKHSEWADFMVLATGKSPWHVRNIAQALIYKAKQKQIGAQQMMLPSVQGQEDGKWIVIDSGKVIVHALDENARAYYNLEGLWTRGTLQNEPVEDLQKVLVKVRRKNNSKKPAQKNV 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03328 185 SUPERFAMILY Nucleotidyltransferase 50 157 IPR043519 -
Vivi3g03328 185 Hamap Ribosomal silencing factor RsfS [rsfS]. 43 152 IPR004394 -
Vivi3g03328 185 FunFam Mitochondrial assembly of ribosomal large subunit 1 47 175 - -
Vivi3g03328 185 PANTHER IOJAP SUPERFAMILY ORTHOLOG 38 166 IPR004394 -
Vivi3g03328 185 NCBIfam ribosome silencing factor 49 151 IPR004394 -
Vivi3g03328 185 Gene3D Beta Polymerase, domain 2 47 166 IPR043519 -
Vivi3g03328 185 Pfam Ribosomal silencing factor during starvation 51 151 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03328 - - gmx:100500659 260.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g03328 3 56180239 56183346 Vivi3g03328 3 56180239 56183346 ECH