Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03318 ATGGCCGCTAAAACAGTCACCAAAGACATAATCACTCTCCGTGGTTCTGCAGCCATCGTTAGCGAGTTCTTCGGATATGCTGCTAACAGTATCCTTTACAATCGAGGTGTTTATCCAGAAGAAACGTTTGTGAAGGTGAAAAAATATGGCCTTCCGATGTTGCTTACCGAAGATGAGGGTGTTAAATCTTTTATAACTAATTTAACTGCTCAGCTTTCTGAATGGCTTGAAGCTGGCAAGTTACAGAGGATTGTGCTTGTTATAATGAGCAAGGCTACTGGTGAAGTTCTTGAAAGGTGGAACTTCAGCATTGAGACAGATAACGAAGTTGTTGAGAAGGGCGTGTCGAGGGAGAAGAGTGACAAGGAAATCATGAGAGAGATACAGGCCATTATGAGGCAGATTGCTTCTAGTATCACCTATTTGCCATGCCTGGATGAACCTTGTGTTTTTGATGTGCTAGCGTATACTGACACGGACGTGGCAGTTCCATTCACTTGGGTTGAGAGTGATCCAAAGCTGATTGAAAATCCGCAAATGGTGAAATTGCATTCATTTGATACTAAGATTCACAAGGTTGACACACTTGTATCATACAAGAATGACGAATGGGATGAGCAGTAA 624 0.4231 MAAKTVTKDIITLRGSAAIVSEFFGYAANSILYNRGVYPEETFVKVKKYGLPMLLTEDEGVKSFITNLTAQLSEWLEAGKLQRIVLVIMSKATGEVLERWNFSIETDNEVVEKGVSREKSDKEIMREIQAIMRQIASSITYLPCLDEPCVFDVLAYTDTDVAVPFTWVESDPKLIENPQMVKLHSFDTKIHKVDTLVSYKNDEWDEQ 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03318 207 ProSiteProfiles HORMA domain profile. 14 197 IPR003511 -
Vivi3g03318 207 Gene3D HORMA domain 1 203 IPR036570 -
Vivi3g03318 207 PANTHER MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD2 5 201 IPR045091 -
Vivi3g03318 207 Pfam HORMA domain 16 191 IPR003511 -
Vivi3g03318 207 FunFam Mitotic spindle checkpoint protein MAD2 1 203 - -
Vivi3g03318 207 SUPERFAMILY The spindle assembly checkpoint protein mad2 10 203 IPR036570 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03318 Vivi-Chr3 56020279 56022015 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03318 K02537 - gmx:100789307 395.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g03318 3 56020279 56022015 Vivi3g03318 3 56020279 56022015 ECH