Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03310 ATGACGGAAAACGAAGGAAAGCGTGACAAAATGGAAAAACTGAAGAAAGGTAAAAGCATGATCGTCTTCACCGGAACTGCCGCAGTGCTCGCAATCGCCGTAAACCTCGTTATCACCGCCGTCAAACACCATAAAGACAAAAATGCAAAGAAGAAAGATCTTGAAGGTTCTAAGGTGAAGGTTAATCTATCTGCATCTGAGATTGTTAAATTAGCAAACCAAATCATTGCCAAGTCAAATGAGGTTCACAATTCCGTTGCGTCAGTGCCTCTCGATAAGGTTACATATGCTAATGTTATATCACCTCTTGCTGAACTTCAAGCGCAACAGTTTCCGTTGATTCAATCTTGTTTGTTACCTAAGTTGGTATCTACTCTGGAGGATGTGCGCAAAGCAAGTGCAGAAGCAGAGAAAAGAATAGATGTGCATCTTGACACGTGCAGCAAGCGTGAAGACATATATCTTGTCGTTAAAGCATTTGCAGTGAGGGGGGACTGGGTTAATGCTGAAACCAAAAGCTTTGTTCAAATTTTGGTGAGAGATTTTGAGCGAAATGGATTGAACCTCAGTGCAAGCAAAAGAGAAGAGTTGATGCGTCTAAAAGCTCAGATTGATGAGTTAAGTGCCATATATATCCAAAATCTCAATGATGCTAGCGCATTTCTTCCCTTCAATGAGGCTGAGTTAGCTGGATTACCTCTAGAATTTCTCAAGGGTTTAGATAAATCTGAAAATGGACAGTTGAAGATTTCCCTGAGAAGCCATCATGTCACAGCTGTACTCGAATTTTGCAAGGTAGGAACTACTAGAAGGATGGTATCACGGGCATATGGAAATCGATGTGGAGAAGCCAATCTTTCTATTTTAGAAAGTCTGGTGCAACAGCGACATAAATATGCTCGTTTACTTGGCTATTCATGCTATGCCGAGTATGCTGTCGATGTTAGAATGGCAAAAACACCAACAAAGGTGTTTGAGTTTCTGAATGACATATCCATACGTATAACTGACTTGGCTATGAAAGAACTTGATATCTTGAAAGATTTGAAGAAAAAAGAGGAAGGGGAGCTTCCATTTGGAATCGAAGACCTACTATATTATGTAAAACGGGTTGAAGAGCAGAGTTACGATTTGGACTTTGGCGAGATCAAGCAATACTTACCAATTAGTTTAGTTCTATCAGGAATCTTCAAAATTGTCCAAGATCTTTTTGGTTTAAGGTTTGAAGAAATTGTGGGAGCCGAAGTTTGGCATTGCGATGTTCGTGTATTTTCAGTATTTGACTTAACTTCAAGTGAACTCTTGGGTTATTGCTACCTTGATTTGTTCTCAAGGGAAGGAAAATATGGTCACAGTTGTGTGGTGCCTCTCCAGAACAGTGCATTAACAATCAGTGGGTCACGACAGATTCCAGTTGCATTACTAATATCTCAGTATAAAAAGGATTCTGACTGTAGTCCTGGATTATTGCGGTTTTCTGAAGTGGTCAATCTTTTCAAAGAGTTCGGTCACGTGGTTCAACACATTTGCAACCGTGCTTCATTTGCTAGAGTTTCTGGAATACGCGTTGATCCTGACTTTGTAGAAATCCCTGCTCAACTCTTACAAAACTGCTGTTATGAAAGCTTTTTTCTGAAGTTGATATCTGGATTTCACCAGGATATCACAAAGCCCTTAAAGGATGACCTGTGCAAATCAATTAAAAGATGGAGAAATTCTTCTTCTGCGCTTAAATTGAAGCAAGAGATTCTATACTGTCTTTTTGACCAAATCATACATTCTGCGGATAACATAGATATTCGTGAGTTATTCAAGCATCTCCATTCCAAGGTGATGTTAGGGTTGCCGGTATTAGAAGGAACCAATCCCGCCTCATGTTTTCCTTTTAGCGTAGTTGGTTATGAGGCAGCATGCTACAGTCGTATATGGAGTGAGGTTTTTGCTGCGGATATATTCGCCTCAATATTTTGCAATGGTATTTCAAACCAGCTTCCCGGCGTGCAGTTTAGGAACAAGGTATTGGCCCCAGGCGGAGCCAAGGATTCTATTGAAGCGATATCAGACTTTTTAGGAAGAAAACCATCGATTCAAGCTTACTTTGAGAACAAAACCAAATATAGTACTTTGTAA 2130 0.4009 MTENEGKRDKMEKLKKGKSMIVFTGTAAVLAIAVNLVITAVKHHKDKNAKKKDLEGSKVKVNLSASEIVKLANQIIAKSNEVHNSVASVPLDKVTYANVISPLAELQAQQFPLIQSCLLPKLVSTLEDVRKASAEAEKRIDVHLDTCSKREDIYLVVKAFAVRGDWVNAETKSFVQILVRDFERNGLNLSASKREELMRLKAQIDELSAIYIQNLNDASAFLPFNEAELAGLPLEFLKGLDKSENGQLKISLRSHHVTAVLEFCKVGTTRRMVSRAYGNRCGEANLSILESLVQQRHKYARLLGYSCYAEYAVDVRMAKTPTKVFEFLNDISIRITDLAMKELDILKDLKKKEEGELPFGIEDLLYYVKRVEEQSYDLDFGEIKQYLPISLVLSGIFKIVQDLFGLRFEEIVGAEVWHCDVRVFSVFDLTSSELLGYCYLDLFSREGKYGHSCVVPLQNSALTISGSRQIPVALLISQYKKDSDCSPGLLRFSEVVNLFKEFGHVVQHICNRASFARVSGIRVDPDFVEIPAQLLQNCCYESFFLKLISGFHQDITKPLKDDLCKSIKRWRNSSSALKLKQEILYCLFDQIIHSADNIDIRELFKHLHSKVMLGLPVLEGTNPASCFPFSVVGYEAACYSRIWSEVFAADIFASIFCNGISNQLPGVQFRNKVLAPGGAKDSIEAISDFLGRKPSIQAYFENKTKYSTL 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03310 709 Gene3D Endopeptidase. Chain P; domain 1 37 184 IPR024080 -
Vivi3g03310 709 Gene3D Neurolysin, domain 3 194 700 IPR024077 -
Vivi3g03310 709 FunFam Thimet oligopeptidase 1 42 184 - -
Vivi3g03310 709 Pfam Peptidase family M3 264 701 IPR001567 GO:0004222|GO:0006508
Vivi3g03310 709 Coils Coil 190 210 - -
Vivi3g03310 709 PANTHER PROTEASE M3 THIMET OLIGOPEPTIDASE-RELATED 37 704 IPR045090 GO:0004222|GO:0006508
Vivi3g03310 709 CDD M3A_TOP 70 701 - -
Vivi3g03310 709 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 61 701 - -
Vivi3g03310 709 FunFam Probable thimet oligopeptidase 388 538 - -
Vivi3g03310 709 Gene3D Collagenase (Catalytic Domain) 388 538 IPR024079 GO:0008237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03310 Vivi-Chr3 55940606 55949288 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03310 K01392 - gmx:100793518 1117.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g03310 3 55940606 55949288 Vivi3g03310 3 55940606 55949288 ECH