Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03309 ATGTTCAAAAAGGTTTTCAGTAAAATCCCTAAAAAGTCCTCAAAAGGTTCTGACAGTCGTGACCAAGGTGGAAACTCAAGAACCCATGCTGTTTCAGCATCAAAAAACAGTGATAATGTTACCTCATCAGGTAGTAGCAAAACCGGTAATTCTTCTTCTTCTTCTTCTTCTTCCTCTTCCTTAGGACAAGGTCAGTATCATAATAATCATGGCAATAATCATGCTAATAATCATGGTAATAAATCTTCGTTACCTATAAACGAGAATTCCAATGGTAATTTCAATTCCTATGAAGCATTGCCGGCTTTTAGAGATGTTCACAATTCCGAGAAACCGAGTTTGTTTATAAAGAAGCTTAGGATGTGTAGTGTTGTTTTTGACTTCACTGACCCTACTAAACACCTCAAAGAGAAAGAGGTTAAGAGACAGACTTTGGTGGAGCTTGTTGATTATGTGTCGTCTGTTAATGCGAAGTTTACTGAGAATGTTATGCAGGAGGTTGTGAAGATGGTGTCTGTAAATATATTCAGAACGCTTAGTCCTCAGCCGCGTGAGAATAAGCTTATTGATGGGGTTGAATTGGAGGAGGAGGAGCCTTCGATGGATCCGTCTTGGCCTCATTTGCAGATTGTGTATGAGCTTTTTCTTAGGTTTGTTGCATCGCCTGAGCTGGATGCGAAGTTGGCTAAGAGGTTTATTGATCAGTCTTTTATTCTGAGGCTGCTTGATTTGTTTGACTCGGAAGATCCTAGAGAGAGGGAGTATTTGAAAATGTCCTTGCATCGTATCTATGGCAAGTTAATGGCGCATCGTCCTTTCATTAGGAAGTCTATCAATAACACCTTTTTGAATTTTGTTTTTGAGACTGAGAAGCATAATGGGATTGCTGAATTCTTGGAAATTCTAGGGAGTATCATTAATGGCTTTGCTTTGCCTTTGAAAGAAGAGCATAAATTGTTTCTGGTTCGGATATTGATTCCGTTGCACAAACCAAAGTGCTTAGCGATGTATCATCAGCAGTTATCTTATTGCGTTACTCAATTTGTGGAGAAAGATTGCAAGCTTGCTGATACGATCATTAGGGGCTTATTGAAGTACTGGCCAATAACAAATAGCTCAAAGGAAGTTATGTTCCTAGGTGAGTTGGAAGAAGTCTTGGAAGCAACACAACCTCCTGAATTCCAGCGATGTATGGTGCTGTTGTTTCGCCGTGTTGCTCATTGTTTGAATAGCCCCCATTTTCAGGTGGCGGAAAGAGCTCTGTTCTTGTGGAATAATGACCATATTGTGAACTTAATCAAGCAGAACTGCAAAGTGATACTTCCCATCATCTTTCCTGCGTTGGAGAAAAATACTAAAACCCATTGGAATCAAGCTGTCCACAGTTTGACTTTAAATGTTCAGAAGATTTTTCAAGATCTCGATCCAGATCTGTATAAAGAATGCTTACAAAAGTTCGAGCAAGACTTGTCAAAAGAAGGTGAAGTGACAGCGGGACGCGAAGCCACGTGGAAACGTTTAGAGGAGGTTGCCGCCAAGAAAGCTGCAGGTAATGAAGCTGTGCTTATTAATAAAACGCTCCCCCGCAAATCGGCTGGTTAG 1602 0.4045 MFKKVFSKIPKKSSKGSDSRDQGGNSRTHAVSASKNSDNVTSSGSSKTGNSSSSSSSSSSLGQGQYHNNHGNNHANNHGNKSSLPINENSNGNFNSYEALPAFRDVHNSEKPSLFIKKLRMCSVVFDFTDPTKHLKEKEVKRQTLVELVDYVSSVNAKFTENVMQEVVKMVSVNIFRTLSPQPRENKLIDGVELEEEEPSMDPSWPHLQIVYELFLRFVASPELDAKLAKRFIDQSFILRLLDLFDSEDPREREYLKMSLHRIYGKLMAHRPFIRKSINNTFLNFVFETEKHNGIAEFLEILGSIINGFALPLKEEHKLFLVRILIPLHKPKCLAMYHQQLSYCVTQFVEKDCKLADTIIRGLLKYWPITNSSKEVMFLGELEEVLEATQPPEFQRCMVLLFRRVAHCLNSPHFQVAERALFLWNNDHIVNLIKQNCKVILPIIFPALEKNTKTHWNQAVHSLTLNVQKIFQDLDPDLYKECLQKFEQDLSKEGEVTAGREATWKRLEEVAAKKAAGNEAVLINKTLPRKSAG 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03309 533 MobiDBLite consensus disorder prediction 1 90 - -
Vivi3g03309 533 SUPERFAMILY ARM repeat 112 493 IPR016024 -
Vivi3g03309 533 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 100 511 IPR002554 GO:0000159|GO:0007165|GO:0019888
Vivi3g03309 533 Gene3D - 108 510 IPR011989 -
Vivi3g03309 533 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 517 IPR002554 GO:0000159|GO:0007165|GO:0019888
Vivi3g03309 533 PIRSF PP2A_B56 1 532 IPR002554 GO:0000159|GO:0007165|GO:0019888
Vivi3g03309 533 FunFam Serine/threonine protein phosphatase 2A regulatory subunit 107 510 - -
Vivi3g03309 533 MobiDBLite consensus disorder prediction 19 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03309 Vivi-Chr3 55924241 55930031 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03309 K11584 - gmx:100811438 833.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g03309 3 55924241 55930031 Vivi3g03309 3 55924241 55930031 ECH