Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03308 ATGGAACTAGGAATGTCTCTCAACGCTTTACTCCATCCTCCTCTATCAAGTTCCTCTTCAACCTTCAACAAATCCTCCTCCTCCTTCAACCAGTCTCTCTTCTCCATTCCAAAACAAATCCCAACCAGAACTCAACAACGCCACCACCGCCATGTCTTGGTGGTTGAAGCAAAAGGTAAAAAAGGAATGGCCTCTCGCCAATTCCAGCGCCCTCCTCCTCCTCCTTTACCAAAAGTCGAAGACGACGGTAACCCCAAGTTCGTTGTCTTCATCCGCATGGCTAATGTAAACCTCTGGTATCCTCTCAGTATTGTTTCCGGCGGCACAACCGCCAAAATCATGATTGCTGCTAAAGATAACTTTCTCGGCAAATATATCTACAAGGATACTCTTGATCGAAATCTTGCTGCAGTTATATACAGAGATGAGAAGGAGATACAGAAAACCGCATTCAAACAACATCCAGTGCTGAAGTCGGCCTCTGAATTCAGATATGGCTATAAGCTTATTGTGAATGGCAATGTAAAAGCCGCACTTTCTTCAAGTAATGTTATTCAGCTTCCTACACCAGATAAACTAAAAACCGTAGCTGATAAAGCGAAAGACTTTTTCGAAGATGTAAAGGATACCTTTCGGCAGATAACATCGTTAGACGCTACTGATGATACTGAGGAGTCTAAGAAAGAAACGAAACAAAAATCTAAGTGA 708 0.428 MELGMSLNALLHPPLSSSSSTFNKSSSSFNQSLFSIPKQIPTRTQQRHHRHVLVVEAKGKKGMASRQFQRPPPPPLPKVEDDGNPKFVVFIRMANVNLWYPLSIVSGGTTAKIMIAAKDNFLGKYIYKDTLDRNLAAVIYRDEKEIQKTAFKQHPVLKSASEFRYGYKLIVNGNVKAALSSSNVIQLPTPDKLKTVADKAKDFFEDVKDTFRQITSLDATDDTEESKKETKQKSK 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03308 235 Pfam Protein HHL1-like 73 178 IPR045388 -
Vivi3g03308 235 MobiDBLite consensus disorder prediction 60 79 - -
Vivi3g03308 235 PANTHER PROTEIN HHL1 CHLOROPLASTIC 1 233 IPR045388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03308 Vivi-Chr3 55912632 55914171 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03308 - - mtr:11442686 305.064